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WormBase Tree Display for Gene: WBGene00029224

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Name Class

WBGene00029224SMapS_parentSequencecb25.fpc0305a
IdentityVersion2
NameCGC_nameCbr-cbn-1From_analysisInferred_from_orthology
Sequence_nameCBG07053
Molecular_nameCBG07053
CBG07053.1
CBP39065
Other_nameCBG_07053Accession_evidenceNDBHE600960
Public_nameCbr-cbn-1
DB_infoDatabaseNDBlocus_tagCBG_07053
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cbn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcbn
RNASeq_FPKMWBls:000000210.1646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
16.4426From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.0603From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
20.1028From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.7024From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.6124From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.48178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.45684From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.91367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.48702From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.5474From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000442.1175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
43.7244From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
45.3314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
38.3823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
40.0979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
42.7966From_analysisRNASeq.briggsae.WBls:0000004.control_mean
48.0539From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.6374From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.36288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
27.099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.4504From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.8863From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.04164From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.63288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003530.1086From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.3434From_analysisRNASeq.briggsae.WBls:0000038.control_median
14.6595From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.9369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
28.2392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.71213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.74989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.152619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.194685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.363759From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.532832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.47597From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.02375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.938411From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.34399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.512From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.82411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.512806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.732341From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.750105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.759908From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.80429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.659307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.695824From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.743141From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010111.2261From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.60474From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.4627From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.81425From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00132680
Ortholog (31)
Paralog (16)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans cbn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07053
Corresponding_CDS_historyCBG07053:bp194
CBG07053:bp255
Corresponding_transcriptCBG07053.1
Other_sequence (17)
Experimental_infoExpr_patternExpr1065392
Microarray_resultsGPL8303_CB6_WBGene00029224_B
GPL14143_CBG07053_815-874_0.782_31_B
GPL14143_CBG07053_1065-1124_0.682_162_A
GPL14143_CBG07053_1289-1348_0.781_39_C
MethodGene