Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00029443

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00029443SMapS_parentSequencecb25.fpc0829
IdentityVersion2
NameCGC_nameCbr-nhr-71From_analysisInferred_from_orthology
Sequence_nameCBG07379
Molecular_nameCBG07379
CBG07379.1
CBP42645
Other_nameCBG_07379Accession_evidenceNDBHE601041
Public_nameCbr-nhr-71
DB_infoDatabaseNDBlocus_tagCBG_07379
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-71
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (33)
RNASeq_FPKMWBls:00000025.87206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.97633From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.24241From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.81452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.05629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.64935From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.74632From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000032.87342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.12992From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.38642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.80406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
3.0213From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.3617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.507From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.6522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
11.2505From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.9085From_analysisRNASeq.briggsae.WBls:0000004.control_mean
12.6242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
14.654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002715.1723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.97964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.65494From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.26896From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.4012From_analysisRNASeq.briggsae.WBls:0000027.control_mean
19.7978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.91362From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003514.0166From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.3373From_analysisRNASeq.briggsae.WBls:0000038.control_mean
10.478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
10.8834From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.2888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
17.0739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.50842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000411.82866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.43081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.56124From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.69167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.82884From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.36423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.47593From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.49017From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.2602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.36546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.77697From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.97649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.18315From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.25455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.47068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.92065From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.4111From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.63904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.47068From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.42338From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.67137From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.57183From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132841
00132842
00132843
00132844
Ortholog (32)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-71.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07379
Corresponding_CDS_historyCBG07379:bp194
CBG07379:bp255
Corresponding_transcriptCBG07379.1
Other_sequenceCRC09219_1
CRC06434_1
PPC00701_1
SRC03933_1
MI00597
PP01715
FC812836.1
CR03298
Experimental_infoExpr_patternExpr1056104
Microarray_resultsGPL8303_CB6_WBGene00029443_A
GPL8303_CB6_WBGene00029443_B
GPL14143_CBG07379_976-1035_0.781_30_B
GPL14143_CBG07379_1418-1477_0.790_12_A
GPL14143_CBG07379_1519-1578_0.779_35_C
MethodGene