WormBase Tree Display for Gene: WBGene00029633

WBGene00029633 SMap: S_parent: Sequence: cb25.fpc0829
  Identity: Version: 2
    Name: CGC_name: Cbr-pag-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG07657
      Molecular_name: CBG07657
        CBG07657.1
        CBP45001
      Other_name: CBG_07657 Accession_evidence: NDB HE601041
      Public_name: Cbr-pag-3
    DB_info: Database: NDB locus_tag CBG_07657
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:59 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-pag-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pag
    RNASeq_FPKM: WBls:0000002 0.966351 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.40339 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        2.17743 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        4.16255 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.03779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.22059 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.89252 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.222795 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.451194 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.679592 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        1.15347 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        2.55803 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 9.45792 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        9.55762 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        9.65733 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        10.1097 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        10.7669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        8.87602 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        9.77357 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 0.092746 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.55047 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        2.43111 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.65012 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.33375 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.11703 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        2.35259 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 1.93443 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.142061 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.793081 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1.00271 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.14532 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.49755 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.57813 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.067772 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.086452 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.134489 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.153902 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.182527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.278856 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.184727 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.186927 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.21302 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.475584 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.105535 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.226669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.301005 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.113334 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.133259 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.271877 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.679592 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.03729 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.879716 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.51266 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (30)
    Paralog: WBGene00024951 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025306 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; C2H2-type zinc finger; and Zinc finger C2H2-type. Is an ortholog of C. elegans pag-3. In C. elegans, pag-3 is involved in several processes, including negative regulation of secretion by cell; neuroblast fate specification; and regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG07657
    Corresponding_CDS_history: CBG07657:bp194
      CBG07657:bp255
    Corresponding_transcript: CBG07657.1
    Other_sequence (21)
  Experimental_info: Expr_pattern: Expr1065755
    Microarray_results: GPL8303_CB6_WBGene00029633_A
      GPL8303_CB6_WBGene00029633_B
      GPL14143_CBG07657_106-165_0.790_22_C
      GPL14143_CBG07657_541-600_0.824_10_A
      GPL14143_CBG07657_653-712_0.835_3_B
  Method: Gene