Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00029857

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00029857SMapS_parentSequencecb25.fpc1402b
IdentityVersion2
NameCGC_nameCbr-mxt-1From_analysisInferred_from_orthology
Sequence_nameCBG07980
Molecular_nameCBG07980
CBG07980.1
CBP39584
Other_nameCBG_07980Accession_evidenceNDBHE600996
Public_nameCbr-mxt-1
DB_infoDatabaseNDBlocus_tagCBG_07980
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
226 Apr 2016 12:32:00WBPerson2970Name_changeCGC_nameCbr-mxt-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmxt
RNASeq_FPKMWBls:000000211.3664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.1602From_analysisRNASeq.briggsae.WBls:0000002.control_mean
36.5644From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
42.5497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
23.9654From_analysisRNASeq.briggsae.WBls:0000002.control_median
24.4161From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.18387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.804827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.68929From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.57376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.25581From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.38885From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000431.1712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
33.7179From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
36.2647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
32.2599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
32.5335From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
33.2107From_analysisRNASeq.briggsae.WBls:0000004.control_mean
33.8241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002721.7943From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
22.2833From_analysisRNASeq.briggsae.WBls:0000027.control_mean
37.3809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.67466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
27.8131From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.5876From_analysisRNASeq.briggsae.WBls:0000027.control_median
44.4027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003566.9276From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003823.5842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
29.2795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
41.4659From_analysisRNASeq.briggsae.WBls:0000038.control_mean
42.657From_analysisRNASeq.briggsae.WBls:0000038.control_median
56.0344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
56.9654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004112.222From_analysisRNASeq.briggsae.WBls:0000041.control_mean
27.4211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.45809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.60476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.00434From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.40391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
11.1297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
13.9182From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.4919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.7668From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006310.6287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
11.1From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
12.0541From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.0106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.1493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.38207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
12.0553From_analysisRNASeq.briggsae.WBls:0000063.control_median
13.6233From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.4693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010121.7943From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.257From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
22.6431From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.8457From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133271
00133272
00133273
00133274
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity and eukaryotic initiation factor 4E binding activity. Predicted to be involved in positive regulation of translation. Is an ortholog of C. elegans mxt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07980
Corresponding_CDS_historyCBG07980:bp194
CBG07980:bp255
Corresponding_transcriptCBG07980.1
Other_sequence (93)
Experimental_infoExpr_patternExpr1058320
Microarray_resultsGPL8303_CB6_WBGene00029857_A
GPL14143_CBG07980_41-100_0.830_53_B
GPL14143_CBG07980_640-699_0.877_22_A
GPL14143_CBG07980_1200-1259_0.957_1_C
MethodGene