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WormBase Tree Display for Gene: WBGene00030923

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Name Class

WBGene00030923SMapS_parentSequencecb25.fpc2220a
IdentityVersion2
NameCGC_nameCbr-nhr-142From_analysisInferred_from_orthology
Sequence_nameCBG09320
Molecular_nameCBG09320a
CBG09320a.1
CBP39032
CBG09320b
CBP44532
CBG09320a.2
CBG09320b.1
Other_nameCBG_09320Accession_evidenceNDBHE600954
Public_nameCbr-nhr-142
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-142
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000022.46197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.26929From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.36949From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.3772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.837594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.73651From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.86563From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.712035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.5026From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.29317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.908521From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.30457From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000045.91755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
6.37408From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.83062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.94218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.24284From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.49547From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.54415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.396297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.587863From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.22445From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.68918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.12166From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.65546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.8322From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.99039From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.075854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.64369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.9452From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.36656From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.24672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.49997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.35083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.56589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.56818From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.57047From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.74647From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.49869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.03458From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.07446From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.5781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.88279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.35366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.39102From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.69197From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.9204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.98907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.52118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.24605From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.52281From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001011.99039From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.86913From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.08096From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.95573From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134349
00134350
00134351
00134352
Ortholog (39)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-142.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09320a
CBG09320b
Corresponding_CDS_historyCBG09320:bp194
CBG09320:bp255
Corresponding_transcriptCBG09320a.1
CBG09320a.2
CBG09320b.1
Other_sequenceFK805104.1
Tcol_isotig05351
Tcol_isotig15592
DVC00231_1
CJC02333_1
Acan_isotig17016
Tcir_isotig07624
Dviv_isotig19447
Tcol_isotig05352
Experimental_infoExpr_patternExpr1050609
Microarray_resultsGPL8303_CB6_WBGene00030923_A
GPL8303_CB6_WBGene00030923_B
GPL14143_CBG09320_1010-1069_0.888_13_C
GPL14143_CBG09320_1101-1160_0.781_49_B
GPL14143_CBG09320_1271-1330_0.739_73_A
MethodGene