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WormBase Tree Display for Gene: WBGene00031130

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Name Class

WBGene00031130SMapS_parentSequencecb25.fpc2220c
IdentityVersion2
NameCGC_nameCbr-nhr-232From_analysisInferred_from_orthology
Sequence_nameCBG09567
Molecular_nameCBG09567
CBG09567.1
CBP45034
Other_nameCBG_09567Accession_evidenceNDBHE600998
Public_nameCbr-nhr-232
DB_infoDatabaseNDBlocus_tagCBG_09567
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-232
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000212.5172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.37395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.83499From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.90871From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.6073From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.37961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.52644From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000036.57363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
7.81184From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.05006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.29361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
6.97243From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.3135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.4844From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.6553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.5308From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.87764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.89379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.9136From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.526081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.3731From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
22.4874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.12886From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.85439From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.18057From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.33569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.78618From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.644301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.4953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
13.3954From_analysisRNASeq.briggsae.WBls:0000038.control_mean
35.7519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.69013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.59272From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000412.05763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.25261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.45771From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.6628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.92186From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.7144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.47647From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.8995From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.29014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.41941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.68699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.89243From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.35241From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.69085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.73189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.20042From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.52163From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.74037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001014.7144From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.31359From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.93362From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.2431From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134596
00134597
00134598
00134599
Ortholog (25)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-232.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09567
Corresponding_CDS_historyCBG09567:bp194
CBG09567:bp255
Corresponding_transcriptCBG09567.1
Other_sequenceCJC00824_1
Experimental_infoExpr_patternExpr1062524
Microarray_resultsGPL8303_CB6_WBGene00031130_A
GPL8303_CB6_WBGene00031130_B
GPL14143_CBG09567_405-464_0.872_16_C
GPL14143_CBG09567_783-842_0.920_2_A
GPL14143_CBG09567_915-974_0.918_3_B
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
MethodGene