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WormBase Tree Display for Gene: WBGene00031164

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Name Class

WBGene00031164SMapS_parentSequencecb25.fpc2220c
IdentityVersion2
NameCGC_nameCbr-chw-1From_analysisInferred_from_orthology
Sequence_nameCBG09604
Molecular_nameCBG09604
CBG09604.1
CBP02358
Other_nameCBG_09604Accession_evidenceNDBHE600998
Public_nameCbr-chw-1
DB_infoDatabaseNDBlocus_tagCBG_09604
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-chw-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchw
RNASeq_FPKMWBls:00000022.59854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.30882From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.71326From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.23241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.65534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.95368From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.19878From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.699138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.876714From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.05429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.980529From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.18816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000413.5719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
15.1499From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
16.7279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.0086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
13.14From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
14.556From_analysisRNASeq.briggsae.WBls:0000004.control_mean
16.3314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.063865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.379546From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.75434From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.81961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.86177From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.90175From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.34399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.04644From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.12637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
19.287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.82777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.77458From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.7214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.99063From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000411.31564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.4343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.47784From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.52138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.82958From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.04702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.96202From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.23797From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.40265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.70683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.57328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.8146From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.27984From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.33108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.88882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.82227From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.86062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
2.07023From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001012.88882From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.60357From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.96792From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.00372From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00134643
00134644
Ortholog (29)
ParalogWBGene00024928Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031162Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033857Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034399Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034424Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035383Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036972Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans chw-1. In C. elegans, chw-1 is involved in establishment or maintenance of cell polarity and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09604
Corresponding_CDS_historyCBG09604:bp194
Corresponding_transcriptCBG09604.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1060468
Microarray_resultsGPL8303_CB6_WBGene00031164_A
GPL8303_CB6_WBGene00031164_B
GPL14143_CBG09604_66-125_0.929_7_C
GPL14143_CBG09604_256-315_0.898_21_A
GPL14143_CBG09604_517-576_0.918_12_B
MethodGene