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WormBase Tree Display for Gene: WBGene00031253

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Name Class

WBGene00031253SMapS_parentSequencecb25.fpc2220c
IdentityVersion3
NameCGC_nameCbr-plrg-1From_analysisInferred_from_orthology
Sequence_nameCBG09714
Molecular_nameCBG09714
CBG09714.1
CBP02337
Other_nameCbr-tag-135From_analysisInferred_from_orthology
CBG_09714Accession_evidenceNDBHE600998
Public_nameCbr-plrg-1
DB_infoDatabaseNDBlocus_tagCBG_09714
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tag-135
313 Apr 2012 16:17:26WBPerson2970Name_changeCGC_nameCbr-plrg-1
Other_nameCbr-tag-135
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classplrg
RNASeq_FPKMWBls:000000267.3818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
72.7892From_analysisRNASeq.briggsae.WBls:0000002.control_mean
74.0666From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
76.9193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
75.493From_analysisRNASeq.briggsae.WBls:0000002.control_median
76.8308From_analysisRNASeq.briggsae.WBls:0000002.control_mean
88.9557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003267.414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
269.806From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
272.199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
275.898From_analysisRNASeq.briggsae.WBls:0000003.control_mean
288.082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004177.138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
177.938From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
178.737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
151.646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
165.999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
172.944From_analysisRNASeq.briggsae.WBls:0000004.control_mean
191.198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002714.0948From_analysisRNASeq.briggsae.WBls:0000027.control_mean
31.5988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.77174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6.91385From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.1207From_analysisRNASeq.briggsae.WBls:0000027.control_mean
18.5562From_analysisRNASeq.briggsae.WBls:0000027.control_median
30.1985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003536.2447From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003826.1354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
35.2185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
39.3691From_analysisRNASeq.briggsae.WBls:0000038.control_median
40.2552From_analysisRNASeq.briggsae.WBls:0000038.control_mean
43.5198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
56.1473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041138.743From_analysisRNASeq.briggsae.WBls:0000041.control_mean
149.998From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
150.717From_analysisRNASeq.briggsae.WBls:0000041.control_median
151.436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
155.648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
97.8905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
120.013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
136.256From_analysisRNASeq.briggsae.WBls:0000041.control_mean
142.551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
146.275From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
38.1199From_analysisRNASeq.briggsae.WBls:0000063.control_mean
45.3888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
47.3082From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
48.9395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
48.9631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
45.0955From_analysisRNASeq.briggsae.WBls:0000063.control_mean
48.1239From_analysisRNASeq.briggsae.WBls:0000063.control_median
79.9736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010147.3082From_analysisRNASeq.briggsae.total_over_all_stages.control_median
77.4393From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
61.7645From_analysisRNASeq.briggsae.total_over_all_stages.control_median
92.2199From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; G-protein beta WD-40 repeat; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans plrg-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09714
Corresponding_CDS_historyCBG09714:bp194
CBG09714:bp255
Corresponding_transcriptCBG09714.1
Other_sequence (88)
Experimental_infoExpr_patternExpr1050888
Microarray_resultsGPL8303_CB6_WBGene00031253_A
GPL14143_CBG09714_889-948_0.926_14_C
GPL14143_CBG09714_1157-1216_0.931_11_B
GPL14143_CBG09714_1272-1331_0.937_7_A
MethodGene