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WormBase Tree Display for Gene: WBGene00031834

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Name Class

WBGene00031834SMapS_parentSequencecb25.fpc2310c
IdentityVersion3
NameCGC_nameCbr-nhr-225From_analysisInferred_from_orthology
Sequence_nameCBG10447
Molecular_nameCBG10447
CBG10447.1
CBP16862
Other_nameCBG_10447Accession_evidenceNDBHE600935
Cbr-nhr-115From_analysisInferred_from_orthology
Public_nameCbr-nhr-225
DB_infoDatabaseNDBlocus_tagCBG_10447
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:51WBPerson2970Name_changeCGC_nameCbr-nhr-115
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-nhr-225
Other_nameCbr-nhr-115
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000020.697463From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.85729From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.919671From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.20426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.03077From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.14169From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.80776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.59122From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.18244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.686899From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.878256From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.65876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.8041From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.94944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.60913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.15073From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.34358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.19275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.340544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.382561From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.80139From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.68106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
11.0331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.53181From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.10932From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000353.35746From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.1121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.69479From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.75485From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.27748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.62983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.44252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.543636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.572631From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.601626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.858133From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.84475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.156From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.17441From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.71037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.90358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.3104From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.386628From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.571731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.05101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.441065From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.546165From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.34385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.05101From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.46949From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.27406From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.80099From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135276
00135277
00135278
00135279
Ortholog (21)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-225.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10447
Corresponding_CDS_historyCBG10447:bp194
CBG10447:bp255
Corresponding_transcriptCBG10447.1
Other_sequenceCR01282
CRC11188_1
Experimental_infoExpr_patternExpr1052913
Microarray_resultsGPL8303_CB6_WBGene00031834_A
GPL14143_CBG10447_836-895_0.733_150_B
GPL14143_CBG10447_890-949_0.909_9_C
GPL14143_CBG10447_980-1039_0.848_65_A
MethodGene