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WormBase Tree Display for Gene: WBGene00032288

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Name Class

WBGene00032288SMapS_parentSequencecb25.fpc2441
IdentityVersion1
NameSequence_nameCBG11107
Molecular_nameCBG11107
CBG11107.1
CBP25778
Other_nameCBG_11107Accession_evidenceNDBHE601351
Public_nameCBG11107
DB_infoDatabaseNDBlocus_tagCBG_11107
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (22)
RNASeq_FPKMWBls:00000023.80238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.80057From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.90674From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.11728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.45892From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.84854From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.67392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000035.76393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
6.98324From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
8.20256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
7.3646From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.1273From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.51531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.75111From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.9869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.38389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
3.79876From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.9218From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.18592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.062698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.406066From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.525358From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.10731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.645139From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.705273From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.00448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.35305From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.78537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.01924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.274From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.40163From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.52877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.27316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.5964From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.6818From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.5113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.48487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.85234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.1263From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.2636From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.4003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.79565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.1693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
8.56849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.58423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.81485From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.97017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.02141From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.61506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.45368From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.69954From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001013.80238From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.80054From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.08641From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.08747From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00135717
00135718
Contained_in_operonCBOPA0361
OrthologWBGene00010363Caenorhabditis elegansFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00070591Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
Cnig_chr_II.g4962Caenorhabditis nigoniFrom_analysisWormBase-Compara
chrIII_pilon.g8869Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00028275Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034414Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038073Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable methylated histone binding activity. Predicted to be involved in chromosome attachment to the nuclear envelope. Is an ortholog of C. elegans H04D03.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11107
Corresponding_CDS_historyCBG11107:bp194
Corresponding_transcriptCBG11107.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1060836
Microarray_resultsGPL8303_CB6_WBGene00032288_A
GPL8303_CB6_WBGene00032288_B
GPL14143_CBG11107_2308-2367_0.652_433_A
MethodGene