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WormBase Tree Display for Gene: WBGene00032334

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Name Class

WBGene00032334SMapS_parentSequencecb25.fpc2454a2
IdentityVersion2
NameCGC_nameCbr-aff-1From_analysisInferred_from_orthology
Sequence_nameCBG11169
Molecular_nameCBG11169
CBG11169.1
CBP17138
Other_nameCBG_11169Accession_evidenceNDBHE601002
Public_nameCbr-aff-1
DB_infoDatabaseNDBlocus_tagCBG_11169
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-aff-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaff
AlleleWBVar00012852
WBVar00012857
WBVar00012847
RNASeq_FPKMWBls:00000021.04717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.21541From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.25659From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.34246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.674753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.08024From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.15188From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.322694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.839637From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.35658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.559758From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.38518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.86809From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.0198From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.0147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.39022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.95805From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.105603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.690695From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.67928From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.24155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.32226From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.95382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.49792From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.10327From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.21162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.37729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
18.6548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.48888From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.60048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.21105From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000410.374112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.444314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.447993From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.451673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.57629From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.03506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.539398From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.613854From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.627123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.750844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.17135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.214817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.31944From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.445282From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.717595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.803208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.380673From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.441906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.444719From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.861657From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.333From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.833132From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.69654From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (25)
ParalogWBGene00024051Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cell-cell fusogen EFF/AFF; Cell-cell fusogen EFF/AFF, domain 3; and Type I membrane glycoproteins cell-cell fusogen. Is an ortholog of C. elegans aff-1. In C. elegans, aff-1 is involved in regulation of egg-laying behavior and syncytium formation by plasma membrane fusion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11169
Corresponding_CDS_historyCBG11169:bp194
Corresponding_transcriptCBG11169.1
Experimental_infoExpr_patternExpr1059600
Microarray_resultsGPL8303_CB6_WBGene00032334_A
GPL8303_CB6_WBGene00032334_B
GPL14143_CBG11169_1181-1240_0.786_18_B
GPL14143_CBG11169_1357-1416_0.797_5_A
GPL14143_CBG11169_1655-1714_0.791_9_C
MethodGene