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WormBase Tree Display for Gene: WBGene00032337

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Name Class

WBGene00032337SMapS_parentSequencecb25.fpc2454a2
IdentityVersion2
NameCGC_nameCbr-slc-36.5From_analysisInferred_from_orthology
Sequence_nameCBG11172
Molecular_nameCBG11172
CBG11172.1
CBP47730
Other_nameCBG_11172Accession_evidenceNDBHE601002
Public_nameCbr-slc-36.5
DB_infoDatabaseNDBlocus_tagCBG_11172
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
229 Apr 2015 12:12:43WBPerson2970Name_changeCGC_nameCbr-slc-36.5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classslc
RNASeq_FPKMWBls:00000023.1804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.56744From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.65018From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.20269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.955075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.9764From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.37392From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.461807From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.923615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.421563From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.448393From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041.5912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.1981From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.6965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.88548From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.10868From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.56522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.479998From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.544094From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.895901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.719998From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.34918From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.95674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.80741From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.842492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.79124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.24456From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.38019From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.96914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.37538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000411.26293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.36696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.67119From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.68959From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.01223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.04265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.24986From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.32527From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.48749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.77936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.368844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.685733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.784346From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.834185From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.89251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.43949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.838428From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.43898From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.46298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.73781From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.73818From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.83836From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.7531From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (42)
Paralog (16)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans slc-36.5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11172
Corresponding_CDS_historyCBG11172:bp194
CBG11172:bp257
Corresponding_transcriptCBG11172.1
Other_sequenceOden_isotig22438
HGC10902_1
HG04132
Experimental_infoExpr_patternExpr1063746
Microarray_resultsGPL8303_CB6_WBGene00032337_A
GPL8303_CB6_WBGene00032337_B
GPL14143_CBG11172_559-618_0.723_33_C
GPL14143_CBG11172_653-712_0.501_145_B
GPL14143_CBG11172_894-953_0.720_38_A
MethodGene