WormBase Tree Display for Gene: WBGene00032648

WBGene00032648 SMap: S_parent: Sequence: cb25.fpc2501a
  Identity: Version: 2
    Name: CGC_name: Cbr-uda-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG11542
      Molecular_name: CBG11542
        CBG11542.1
        CBP17199
      Other_name: CBG_11542 Accession_evidence: NDB HE600985
      Public_name: Cbr-uda-1
    DB_info: Database: NDB locus_tag CBG_11542
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:02 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-uda-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: uda
    RNASeq_FPKM: WBls:0000002 27.9482 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        30.3437 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        35.6779 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        48.7419 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        32.9422 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        35.5407 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        35.6436 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 61.0927 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        65.5918 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        70.0909 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        68.1177 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        73.1696 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 46.2387 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        46.3714 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        46.5041 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        44.8276 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        48.5946 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        51.2354 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        54.1672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 11.895 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        19.7004 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.61157 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        43.5945 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        17.8065 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        20.7048 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        23.718 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 19.4308 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 16.4299 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        23.2428 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        23.9433 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        24.6437 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        27.4768 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        45.5908 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 68.6763 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        71.4408 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        72.8343 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        72.8558 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        74.2707 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        76.9495 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        47.8877 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        68.6494 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        72.0562 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        72.6716 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        39.999 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        44.6668 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        50.9125 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        51.917 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        52.4988 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        37.1456 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        39.5234 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        47.7896 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 38.0912 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        43.5945 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        40.6581 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        44.7472 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00136026
    Ortholog (29)
    Paralog: WBGene00035179 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037242 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038656 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable hydrolase activity. Is an ortholog of C. elegans uda-1. In C. elegans, uda-1 is involved in GDP metabolic process and UDP metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG11542
    Corresponding_transcript: CBG11542.1
    Other_sequence (33)
  Experimental_info: Expr_pattern: Expr1050483
    Microarray_results: GPL8303_CB6_WBGene00032648_A
      GPL14143_CBG11542_133-192_0.764_123_C
      GPL14143_CBG11542_512-571_0.939_6_B
      GPL14143_CBG11542_630-689_0.904_28_A
  Method: Gene