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WormBase Tree Display for Gene: WBGene00032699

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Name Class

WBGene00032699SMapS_parentSequencecb25.fpc2501a
IdentityVersion2
NameCGC_nameCbr-xbx-1From_analysisInferred_from_orthology
Sequence_nameCBG11597
Molecular_nameCBG11597
CBG11597.1
CBP27892
Other_nameCBG_11597Accession_evidenceNDBHE600985
Public_nameCbr-xbx-1
DB_infoDatabaseNDBlocus_tagCBG_11597
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-xbx-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classxbx
RNASeq_FPKMWBls:00000021.08075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.50307From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.53539From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.89307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.58971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.27473From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.30807From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.27703From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.554061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.429454From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.7343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000042.05687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.34953From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.6422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
2.39164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
2.80665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.80722From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.13872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.45338From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.36012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6e-06From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8e-06From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.79989From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.98998From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.59978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.28943From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.758409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.920874From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.08334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.08699From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.50622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6e-06From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.018014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.057511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.096233From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.134955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.513847From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.84491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.679303From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.774191From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.22365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.36611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.307065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.396584From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.447561From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.681102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.853053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.251115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.351824From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.41482From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.821605From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.07468From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.958471From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.27019From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136071
00136072
00136073
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to be involved in intraciliary retrograde transport and intraciliary transport involved in cilium assembly. Predicted to be part of cytoplasmic dynein complex. Is an ortholog of C. elegans xbx-1. In C. elegans, xbx-1 is involved in intraciliary retrograde transport and non-motile cilium assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11597
Corresponding_CDS_historyCBG11597:bp194
Corresponding_transcriptCBG11597.1
Experimental_infoExpr_patternExpr1059236
Expr1060803
Microarray_resultsGPL8303_CB6_WBGene00032699_A
GPL8303_CB6_WBGene00032700_A
GPL8303_CB6_WBGene00032700_B
GPL14143_CBG11597_518-577_0.899_12_B
GPL14143_CBG11597_613-672_0.897_14_C
GPL14143_CBG11597_1047-1106_0.947_2_A
GPL14143_CBG11598_230-289_0.825_48_C
GPL14143_CBG11598_250-309_0.914_13_B
GPL14143_CBG11598_764-823_0.841_39_A
ReferenceWBPaper00063946
MethodGene