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WormBase Tree Display for Gene: WBGene00033146

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Name Class

WBGene00033146SMapS_parentSequencecb25.fpc2887a
IdentityVersion2
NameCGC_nameCbr-nhr-86From_analysisInferred_from_orthology
Sequence_nameCBG12152
Molecular_nameCBG12152
CBG12152.1
CBP40595
Other_nameCBG_12152Accession_evidenceNDBHE600941
Public_nameCbr-nhr-86
DB_infoDatabaseNDBlocus_tagCBG_12152
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-nhr-86
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar00118285
WBVar00118286
WBVar00118281
WBVar00118282
WBVar00118283
WBVar00118284
RNASeq_FPKMWBls:000000218.9468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.1549From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
20.3707From_analysisRNASeq.briggsae.WBls:0000002.control_mean
23.0104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.0826From_analysisRNASeq.briggsae.WBls:0000002.control_median
23.0889From_analysisRNASeq.briggsae.WBls:0000002.control_mean
31.2436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000341.9337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
42.4002From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
42.8666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
44.6631From_analysisRNASeq.briggsae.WBls:0000003.control_mean
49.189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000430.2559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
32.8253From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
35.3947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.2104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
31.3411From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
33.5369From_analysisRNASeq.briggsae.WBls:0000004.control_mean
42.4826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002715.8861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.59805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6.69847From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.06087From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.95052From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.20257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.8463From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000357.62437From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.4971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
11.5572From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.6173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.9234From_analysisRNASeq.briggsae.WBls:0000038.control_mean
20.2619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.31748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004124.6388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
36.8918From_analysisRNASeq.briggsae.WBls:0000041.control_mean
40.6207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
40.7432From_analysisRNASeq.briggsae.WBls:0000041.control_median
40.8657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
41.4418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
30.3244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
32.9684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
35.1433From_analysisRNASeq.briggsae.WBls:0000041.control_mean
36.7946From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006313.0802From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.0994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.0753From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.2887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
17.9374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.6178From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.182From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.3062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010117.0753From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.808From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
19.0508From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.5974From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136482
00136483
00136484
00136485
Ortholog (49)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-86.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12152
Corresponding_CDS_historyCBG12152:bp194
CBG12152:bp255
Corresponding_transcriptCBG12152.1
Other_sequenceFC817912.1
CR06697
FC818177.1
Experimental_infoExpr_patternExpr1064206
Microarray_resultsGPL8303_CB6_WBGene00033146_A
GPL8303_CB6_WBGene00033146_B
GPL14143_CBG12152_799-858_0.910_9_C
GPL14143_CBG12152_1079-1138_0.936_1_B
GPL14143_CBG12152_1243-1302_0.860_47_A
MethodGene