WormBase Tree Display for Gene: WBGene00033322

WBGene00033322 SMap: S_parent: Sequence: cb25.fpc2887d2
  Identity: Version: 2
    Name: CGC_name: Cbr-lmn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG12363
      Molecular_name: CBG12363
        CBG12363.1
        CBP36273
      Other_name: CBG_12363 Accession_evidence: NDB HE600913
      Public_name: Cbr-lmn-1
    DB_info: Database: NDB locus_tag CBG_12363
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:02 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-lmn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lmn
    Allele: WBVar00118459
      WBVar00118460
      WBVar00118461
      WBVar00118457
      WBVar00118458
      WBVar00008934
    RNASeq_FPKM: WBls:0000002 141.636 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        154.982 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        159.442 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        163.869 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        154.985 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        154.992 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        157.217 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 388.827 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        396.46 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        404.092 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        402.62 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        414.94 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 259.355 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        263.174 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        266.994 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        247.731 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        252.439 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        259.239 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        269.674 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 12.6064 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        181.632 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        41.3489 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        78.5291 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        137.585 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        89.4669 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        93.2931 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 132.224 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 117.794 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        131.01 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        137.48 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        143.95 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        144.219 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        51.9951 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 124.61 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        169.704 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        178.151 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        182.493 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        186.836 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        189.221 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        138.509 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        147.702 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        160.838 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        162.926 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 133.656 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        140.195 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        147.366 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        148.638 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        159.606 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        228.175 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        136.216 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        143.781 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        155.708 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 159.442 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        171.607 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        157.217 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        180.958 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Contained_in_operon: CBOPA0899
    Ortholog (34)
    Paralog (13)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Lamin tail domain; Lamin tail domain superfamily; Lamin Tail Domain; Intermediate filament, rod domain; and Intermediate filament protein. Is an ortholog of C. elegans lmn-1. In C. elegans, lmn-1 is involved in several processes, including cellular localization; determination of adult lifespan; and regulation of cell cycle. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG12363
    Corresponding_CDS_history: CBG12363:bp194
    Corresponding_transcript: CBG12363.1
    Other_sequence (22)
  Experimental_info: Expr_pattern: Expr1057099
    Microarray_results: GPL8303_CB6_WBGene00033322_A
      GPL8303_CB6_WBGene00033322_B
      GPL14143_CBG12363_1290-1349_0.928_2_C
      GPL14143_CBG12363_1382-1441_0.930_1_A
      GPL14143_CBG12363_1432-1491_0.905_8_B
  Method: Gene