WormBase Tree Display for Gene: WBGene00033368

WBGene00033368 SMap: S_parent: Sequence: cb25.fpc2887d2
  Identity: Version: 3
    Name: CGC_name: Cbr-syx-7 From_analysis: Inferred_from_orthology
      Sequence_name: CBG12415
      Molecular_name: CBG12415
        CBG12415.1
        CBP22684
      Other_name: Cbr-syn-13 From_analysis: Inferred_from_orthology
        CBG_12415 Accession_evidence: NDB HE600913
      Public_name: Cbr-syx-7
    DB_info: Database: NDB locus_tag CBG_12415
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:02 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-syn-13
        3 16 Apr 2010 14:36:35 WBPerson2970 Name_change: CGC_name: Cbr-syx-7
                Other_name: Cbr-syn-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: syx
    RNASeq_FPKM: WBls:0000002 33.5618 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        36.9309 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        41.0781 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        52.7416 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        42.0721 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        42.6119 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        47.2133 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 65.2656 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        79.4099 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        93.5542 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        74.084 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        77.6346 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 56.6058 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        57.4396 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        58.2734 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        52.2077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        54.4828 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        56.9062 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        62.9612 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 1.72852 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        17.9939 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        46.7115 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        5.54152 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        14.2878 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        19.2539 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        23.0341 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 23.8011 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 26.258 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        29.8879 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        32.5208 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        3.84008 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        38.7836 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        50.6698 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 40.3399 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        51.0439 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        52.3165 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        53.7735 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        55.2306 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        56.2888 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        50.3429 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        54.0044 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        69.5077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 20.7189 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        21.582 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        25.0754 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        25.8603 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        26.9269 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        34.9984 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        25.371 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        25.6666 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        25.828 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 34.9984 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        36.3814 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        39.5617 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        39.8569 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00136739
      00136740
    Ortholog (29)
    Paralog: WBGene00026391 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026410 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029415 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030474 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033438 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035094 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041656 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans syx-7. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG12415
    Corresponding_CDS_history: CBG12415:bp194
    Corresponding_transcript: CBG12415.1
    Other_sequence (42)
  Experimental_info: Expr_pattern: Expr1064965
    Microarray_results: GPL8303_CB6_WBGene00033368_A
      GPL8303_CB6_WBGene00033368_B
      GPL14143_CBG12415_164-223_0.632_106_C
      GPL14143_CBG12415_294-353_0.942_6_B
      GPL14143_CBG12415_558-617_0.945_3_A
  Method: Gene