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WormBase Tree Display for Gene: WBGene00033382

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Name Class

WBGene00033382SMapS_parentSequencecb25.fpc2887d2
IdentityVersion2
NameCGC_nameCbr-hgo-1From_analysisInferred_from_orthology
Sequence_nameCBG12429
Molecular_nameCBG12429
CBG12429.1
CBP22687
Other_nameCBG_12429Accession_evidenceNDBHE600913
Public_nameCbr-hgo-1
DB_infoDatabaseNDBlocus_tagCBG_12429
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-hgo-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhgo
RNASeq_FPKMWBls:0000002102.013From_analysisRNASeq.briggsae.WBls:0000002.control_mean
154.734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
64.0755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
87.2302From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
75.3755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
81.3028From_analysisRNASeq.briggsae.WBls:0000002.control_median
95.3538From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000319.019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
21.391From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
23.763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
16.4431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
19.7417From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000453.2435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
53.8895From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
54.5355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
45.3535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
46.35From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
47.4694From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
49.3904From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:0000027121.611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.2912From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
47.2855From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.95435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
33.7648From_analysisRNASeq.briggsae.WBls:0000027.control_median
48.7737From_analysisRNASeq.briggsae.WBls:0000027.control_mean
53.2383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003570.228From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038186.445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
26.2151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
64.8993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
73.1056From_analysisRNASeq.briggsae.WBls:0000038.control_median
81.3118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
89.7178From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004140.1153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
42.5992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
47.9458From_analysisRNASeq.briggsae.WBls:0000041.control_median
48.7643From_analysisRNASeq.briggsae.WBls:0000041.control_mean
53.2923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
59.0504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
104.152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
55.9179From_analysisRNASeq.briggsae.WBls:0000041.control_median
58.5434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
59.6254From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006363.941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
73.2982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
80.7672From_analysisRNASeq.briggsae.WBls:0000063.control_mean
82.3322From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
86.9151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
97.3494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
80.4145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
80.7084From_analysisRNASeq.briggsae.WBls:0000063.control_mean
81.3734From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010164.8993From_analysisRNASeq.briggsae.total_over_all_stages.control_median
70.4953From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
64.0082From_analysisRNASeq.briggsae.total_over_all_stages.control_median
67.6764From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136758
00136759
00136760
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to enable homogentisate 1,2-dioxygenase activity. Predicted to be involved in L-phenylalanine catabolic process and tyrosine metabolic process. Is an ortholog of C. elegans hgo-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12429
Corresponding_CDS_historyCBG12429:bp194
CBG12429:bp255
Corresponding_transcriptCBG12429.1
Other_sequence (148)
Experimental_infoExpr_patternExpr1065749
Microarray_resultsGPL8303_CB6_WBGene00033382_A
GPL8303_CB6_WBGene00033382_B
GPL14143_CBG12429_679-738_0.745_110_C
GPL14143_CBG12429_750-809_0.916_3_B
GPL14143_CBG12429_1094-1153_0.948_1_A
MethodGene