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WormBase Tree Display for Gene: WBGene00033950

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Name Class

WBGene00033950SMapS_parentSequencecb25.fpc2969
IdentityVersion1
NameSequence_nameCBG13138
Molecular_nameCBG13138
CBG13138.1
CBP17727
Other_nameCBG_13138Accession_evidenceNDBHE601401
Public_nameCBG13138
DB_infoDatabaseNDBlocus_tagCBG_13138
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00004724
WBVar00032134
RNASeq_FPKMWBls:000000222.0806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.9741From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.847From_analysisRNASeq.briggsae.WBls:0000002.control_mean
34.4863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.5397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
23.0273From_analysisRNASeq.briggsae.WBls:0000002.control_median
23.2702From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.147561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.365458From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.583356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.282093From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.33767From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000042.11679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.34644From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.57608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.97725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.44268From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.54747From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.9958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.666265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.8928From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.88011From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
35.1321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
19.0061From_analysisRNASeq.briggsae.WBls:0000027.control_median
24.8494From_analysisRNASeq.briggsae.WBls:0000027.control_mean
60.7193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003520.4531From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.67228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
24.862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
26.062From_analysisRNASeq.briggsae.WBls:0000038.control_median
27.2621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
27.6208From_analysisRNASeq.briggsae.WBls:0000038.control_mean
56.687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.8429From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.1638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.2298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.70016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.98894From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.27772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
13.9892From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.7678From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.7007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
28.5344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000633.56497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.73364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.12779From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.18838From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.13924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.37624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.0758From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.32761From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.0238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010118.7831From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.13924From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.9744From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.58152From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (42)
Paralog (16)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans F21D12.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13138
Corresponding_CDS_historyCBG13138:bp194
Corresponding_transcriptCBG13138.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1069352
Microarray_resultsGPL8303_CB6_WBGene00033950_A
GPL8303_CB6_WBGene00033950_B
GPL14143_CBG13138_753-812_0.867_23_B
GPL14143_CBG13138_1176-1235_0.897_12_C
GPL14143_CBG13138_1382-1441_0.962_1_A
MethodGene