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WormBase Tree Display for Gene: WBGene00033952

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Name Class

WBGene00033952SMapS_parentSequencecb25.fpc2969
IdentityVersion2
NameCGC_nameCbr-nhr-21From_analysisInferred_from_orthology
Sequence_nameCBG13142
Molecular_nameCBG13142a
CBG13142a.1
CBP43592
CBG13142b
CBP40937
CBG13142b.1
Other_nameCBG_13142Accession_evidenceNDBHE601401
Public_nameCbr-nhr-21
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-21
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000212.6139From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.6575From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
17.1521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.03199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.9478From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.3035From_analysisRNASeq.briggsae.WBls:0000002.control_median
9.94956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.25834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.80938From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.36042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.07032From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.5922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.60407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.00988From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.4157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.75458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.10649From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.15159From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.87711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002720.2496From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.39898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
5.21549From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
53.1342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
11.0771From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.9388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
19.4219From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003518.545From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.639373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
14.6165From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.1934From_analysisRNASeq.briggsae.WBls:0000038.control_median
22.313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
27.4397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.07388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004112.432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.64938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.66288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.33717From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.01147From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.43893From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.8222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.3993From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.8181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.41683From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000631.82215From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.0901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.30761From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.32431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.40022From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.45694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.31596From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.91446From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.48564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.7756From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.01147From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.1536From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.21358From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00137381
00137382
00137383
00137384
Ortholog (32)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-21.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13142a
CBG13142b
Corresponding_CDS_historyCBG13142:bp194
CBG13142:bp255
Corresponding_transcriptCBG13142a.1
CBG13142b.1
Other_sequenceCBC06536_1
FC821971.1
SR04027
FC821355.1
Tcol_isotig24551
SRC05235_1
MHC06272_1
Experimental_infoExpr_patternExpr1056247
Microarray_resultsGPL8303_CB6_WBGene00033952_A
GPL8303_CB6_WBGene00033952_B
GPL14143_CBG13142_625-684_0.910_12_C
GPL14143_CBG13142_1082-1141_0.930_4_B
GPL14143_CBG13142_1279-1338_0.880_26_A
MethodGene