Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00034190

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00034190SMapS_parentSequencecb25.fpc3052a
IdentityVersion2
NameCGC_nameCbr-apn-1From_analysisInferred_from_orthology
Sequence_nameCBG13421
Molecular_nameCBG13421
CBG13421.1
CBP09398
Other_nameCBG_13421Accession_evidenceNDBHE600919
Public_nameCbr-apn-1
DB_infoDatabaseNDBlocus_tagCBG_13421
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-apn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classapn
RNASeq_FPKMWBls:000000215.2274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
34.4876From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
40.3699From_analysisRNASeq.briggsae.WBls:0000002.control_mean
71.3948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
39.3949From_analysisRNASeq.briggsae.WBls:0000002.control_median
41.353From_analysisRNASeq.briggsae.WBls:0000002.control_mean
44.3021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003106.026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
149.158From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
192.289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
132.129From_analysisRNASeq.briggsae.WBls:0000003.control_mean
98.0722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000431.7861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
33.0698From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
34.3535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.8415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
29.7168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
30.5317From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
31.0459From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.960688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.29237From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.89578From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.43429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
13.4589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.36333From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.28656From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003515.5006From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003818.1339From_analysisRNASeq.briggsae.WBls:0000038.control_median
18.7662From_analysisRNASeq.briggsae.WBls:0000038.control_mean
27.4368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.51314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
35.2838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.83099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004124.4723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
65.2039From_analysisRNASeq.briggsae.WBls:0000041.control_mean
74.3849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
75.5954From_analysisRNASeq.briggsae.WBls:0000041.control_median
76.8058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
85.1526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
35.0032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
39.4From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
55.8698From_analysisRNASeq.briggsae.WBls:0000041.control_mean
56.8924From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006325.3385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
27.6723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
32.3304From_analysisRNASeq.briggsae.WBls:0000063.control_mean
33.605From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
33.787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
41.2493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
33.696From_analysisRNASeq.briggsae.WBls:0000063.control_median
35.6654From_analysisRNASeq.briggsae.WBls:0000063.control_mean
52.3403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010127.4368From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.3106From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
30.1243From_analysisRNASeq.briggsae.total_over_all_stages.control_median
37.4914From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137671
00137672
00137673
Ortholog (24)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans apn-1. In C. elegans, apn-1 is involved in base-excision repair.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13421
Corresponding_CDS_historyCBG13421:bp194
Corresponding_transcriptCBG13421.1
Other_sequence (33)
Experimental_infoExpr_patternExpr1065361
Microarray_resultsGPL8303_CB6_WBGene00034190_A
GPL8303_CB6_WBGene00034190_B
GPL14143_CBG13421_975-1034_0.820_13_A
MethodGene