Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00034255

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00034255SMapS_parentSequencecb25.fpc3052b
IdentityVersion3
NameSequence_nameCBG13498
Molecular_nameCBG13498a
CBG13498a.1
CBP17813
CBG13498b
CBP37658
CBG13498b.1
Other_nameCBG_13498Accession_evidenceNDBHE600980
Public_nameCBG13498
DB_infoDatabaseNDBlocus_tagCBG_13498
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-pax-2
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000022.2844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.97174From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.99548From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.7303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.69315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.83244From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.6699From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.22908From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.42613From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.62319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.1001From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.31746From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000413.2476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.2611From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
13.2746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
13.9826From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.0377From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.1683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
15.1847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.484105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.906653From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.86936From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.21733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.90714From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.37893From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.90762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.64372From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.23167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.79242From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.13536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.249From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.36264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.44002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.489382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.541495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.656403From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.771311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.8458From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.58101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.06894From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.12069From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.36656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.9744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.570768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.581047From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.582909From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.785628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.965932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.503335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.568095From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.576838From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001012.2844From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.17899From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.45379From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.66122From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137747
00137748
Ortholog (33)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans egl-38 and pax-2. In C. elegans, egl-38 is involved in several processes, including developmental process involved in reproduction; positive regulation of transcription by RNA polymerase II; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13498a
CBG13498b
Corresponding_CDS_historyCBG13498:bp194
CBG13498:bp213
CBG13498a:bp257
Corresponding_transcriptCBG13498a.1
CBG13498b.1
Other_sequence (15)
Experimental_infoExpr_patternExpr1060055
Microarray_resultsGPL8303_CB6_WBGene00034255_A
GPL8303_CB6_WBGene00034255_B
GPL14143_CBG13498_488-547_0.922_2_C
GPL14143_CBG13498_902-961_0.676_72_A
GPL14143_CBG13498_1003-1062_0.469_133_B
Remark[180319 gw3] The CGC name Cbr-pax-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene