WormBase Tree Display for Gene: WBGene00034323

WBGene00034323 SMap: S_parent: Sequence: cb25.fpc3052b
  Identity: Version: 2
    Name: CGC_name: Cbr-nhr-92 From_analysis: Inferred_from_orthology
      Sequence_name: CBG13575
      Molecular_name: CBG13575
        CBG13575.1
        CBP17830
      Other_name: CBG_13575 Accession_evidence: NDB HE600980
      Public_name: Cbr-nhr-92
    DB_info: Database: NDB locus_tag CBG_13575
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 21 Apr 2008 17:10:51 WBPerson2970 Name_change: CGC_name: Cbr-nhr-92
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000002 13.1051 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        5.53823 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        9.08481 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        9.24271 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        7.89028 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        8.48755 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        8.9046 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.089057 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.178115 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.059372 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 9.39102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        9.57662 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        9.76222 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        12.0176 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        7.64473 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        8.50632 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        9.46438 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 0.129858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1.38503 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        25.4533 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        8.9894 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.35582 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        5.32661 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        8.0737 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 8.78795 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.297883 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        10.8336 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        29.1923 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        5.23253 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        6.9221 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        8.61167 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 2.08172 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2.14137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.4865 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.54825 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.83162 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        3.13831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        2.94912 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        3.06661 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        3.1018 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.35116 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        3.56179 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        3.61857 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        4.5556 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        4.63638 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        4.99842 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        2.54302 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        3.392 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        4.08708 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 4.63638 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.17576 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        5.11548 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.09061 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00137844
      00137845
      00137846
      00137847
    Ortholog (23)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-92. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG13575
    Corresponding_CDS_history: CBG13575:bp194
      CBG13575:bp257
    Corresponding_transcript: CBG13575.1
  Experimental_info: Expr_pattern: Expr1067775
    Microarray_results: GPL8303_CB6_WBGene00034323_A
      GPL14143_CBG13575_644-703_0.940_8_C
      GPL14143_CBG13575_729-788_0.963_1_B
      GPL14143_CBG13575_841-900_0.962_2_A
  Method: Gene