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WormBase Tree Display for Gene: WBGene00034327

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Name Class

WBGene00034327SMapS_parentSequencecb25.fpc3052b
IdentityVersion2
NameCGC_nameCbr-nhr-274From_analysisInferred_from_orthology
Sequence_nameCBG13579
Molecular_nameCBG13579
CBG13579.1
CBP39201
Other_nameCBG_13579Accession_evidenceNDBHE600980
Public_nameCbr-nhr-274
DB_infoDatabaseNDBlocus_tagCBG_13579
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-nhr-274
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000223.7714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
27.6184From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.7421From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.3418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
29.542From_analysisRNASeq.briggsae.WBls:0000002.control_median
32.4717From_analysisRNASeq.briggsae.WBls:0000002.control_mean
47.0317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000346.861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
50.813From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
54.7649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
52.9129From_analysisRNASeq.briggsae.WBls:0000003.control_mean
57.1127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000435.068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
37.4898From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
39.9116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
35.6797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
37.6516From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
38.6606From_analysisRNASeq.briggsae.WBls:0000004.control_mean
44.9922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.06966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.4462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.8471From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.78765From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.3462From_analysisRNASeq.briggsae.WBls:0000027.control_mean
21.0218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.64665From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003515.4449From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.8076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
11.3435From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.9398From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.0721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
18.2926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.20174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004126.5237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.7016From_analysisRNASeq.briggsae.WBls:0000041.control_mean
40.0728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
40.9911From_analysisRNASeq.briggsae.WBls:0000041.control_median
41.9094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
42.3006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
31.7391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
36.8848From_analysisRNASeq.briggsae.WBls:0000041.control_mean
38.763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
39.4179From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006313.4334From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.8858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.6263From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
17.1409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.5139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
14.8637From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.3836From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.0155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010120.266From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.2374From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
23.5607From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.813From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137858
00137859
00137860
00137861
Ortholog (29)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-274.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG13579
Corresponding_CDS_historyCBG13579:bp194
CBG13579:bp255
Corresponding_transcriptCBG13579.1
Other_sequenceCR04040
CBC15348_1
CRC08326_1
Experimental_infoExpr_patternExpr1060300
Microarray_resultsGPL14143_CBG13579_808-867_0.906_27_B
GPL14143_CBG13579_932-991_0.915_21_C
GPL14143_CBG13579_1051-1110_0.831_109_A
MethodGene