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WormBase Tree Display for Gene: WBGene00034808

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Name Class

WBGene00034808SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-del-9From_analysisInferred_from_orthology
Sequence_nameCBG14244
Molecular_nameCBG14244a
CBG14244a.1
CBP09587
CBG14244b
CBP41927
CBG14244b.1
Other_nameCBG_14244Accession_evidenceNDBHE600983
Public_nameCbr-del-9
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
224 Feb 2012 15:38:17WBPerson2970Name_changeCGC_nameCbr-del-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdel
RNASeq_FPKMWBls:00000021.35021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.3955From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.41384From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.49581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.44962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.17279From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.37285From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.084831From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.169661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.056554From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.698792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0.754408From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.810023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.6215From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.674261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.748954From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.940196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.105454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.439816From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.921103From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.21804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.968718From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.06523From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.49762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.58478From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.608753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.02857From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.10635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.27806From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.44977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.9494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.424736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.591669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.664349From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.73703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.871729From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.73348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.23526From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.37887From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.81697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.96934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.34253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.429416From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.568676From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.700226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.37121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.564821From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.721349From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.48471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.810023From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.13798From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.875109From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.14357From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138291
00138292
00138293
Ortholog (25)
Paralog (27)
Structured_descriptionAutomated_descriptionPredicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans del-9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14244a
CBG14244b
Corresponding_CDS_historyCBG14244:bp194
Corresponding_transcriptCBG14244a.1
CBG14244b.1
Other_sequenceJI211942.1
ACC32901_1
EY469793.1
Experimental_infoExpr_patternExpr1050348
Microarray_resultsGPL8303_CB6_WBGene00034808_A
GPL8303_CB6_WBGene00034808_B
GPL14143_CBG14244_873-932_0.773_27_A
GPL14143_CBG14244_946-1005_0.800_5_B
GPL14143_CBG14244_1048-1107_0.767_36_C
MethodGene