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WormBase Tree Display for Gene: WBGene00034982

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Name Class

WBGene00034982SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-nhr-45From_analysisInferred_from_orthology
Sequence_nameCBG14515
Molecular_name (15)
Other_nameCBG_14515Accession_evidenceNDBHE600983
Public_nameCbr-nhr-45
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-45
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000224.8788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.5149From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
27.8119From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
28.8766From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.2785From_analysisRNASeq.briggsae.WBls:0000002.control_median
32.0706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000323.7038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
27.0443From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
30.3848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
28.9965From_analysisRNASeq.briggsae.WBls:0000003.control_mean
32.901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000446.9183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
47.9393From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
48.9602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
45.5235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
49.422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
49.998From_analysisRNASeq.briggsae.WBls:0000004.control_mean
59.1658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002720.2412From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
34.1624From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.24006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
76.006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
48.1236From_analysisRNASeq.briggsae.WBls:0000027.control_median
48.3273From_analysisRNASeq.briggsae.WBls:0000027.control_mean
90.8219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003560.0302From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038123.225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
31.0544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
49.5134From_analysisRNASeq.briggsae.WBls:0000038.control_median
57.3876From_analysisRNASeq.briggsae.WBls:0000038.control_mean
67.9723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.29858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004114.4082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
16.4333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.6305From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.8277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
19.4258From_analysisRNASeq.briggsae.WBls:0000041.control_mean
30.0342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
17.2105From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.5933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
19.7854From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.4156From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006311.8917From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.4662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
14.9336From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
15.0775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
15.9812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
13.095From_analysisRNASeq.briggsae.WBls:0000063.control_mean
15.0056From_analysisRNASeq.briggsae.WBls:0000063.control_median
19.1117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010126.5149From_analysisRNASeq.briggsae.total_over_all_stages.control_median
37.2311From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
30.2095From_analysisRNASeq.briggsae.total_over_all_stages.control_median
38.1507From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138474
00138475
00138476
00138477
Ortholog (32)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-45.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14515a
CBG14515b
CBG14515c
CBG14515d
CBG14515e
Corresponding_CDS_historyCBG14515:bp194
CBG14515:bp255
Corresponding_transcriptCBG14515a.1
CBG14515b.1
CBG14515c.1
CBG14515d.1
CBG14515e.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1055611
Microarray_resultsGPL8303_CB6_WBGene00034982_A
GPL8303_CB6_WBGene00034982_B
GPL14143_CBG14515_1515-1574_0.813_1_A
GPL14143_CBG14515_1574-1633_0.782_30_C
GPL14143_CBG14515_1658-1717_0.796_15_B
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
WBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene