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WormBase Tree Display for Gene: WBGene00035167

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Name Class

WBGene00035167SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-ctbp-1From_analysisInferred_from_orthology
Sequence_nameCBG14767
Molecular_nameCBG14767a
CBG14767a.1
CBP39946
CBG14767b
CBP47701
CBG14767c
CBP47807
CBG14767b.1
CBG14767c.1
Other_nameCBG_14767Accession_evidenceNDBHE600983
Public_nameCbr-ctbp-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ctbp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctbp
RNASeq_FPKMWBls:00000027.91036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
9.0262From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.23159From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.93666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.20907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.82192From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.57098From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.02312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.46674From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.91037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.28255From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
2.40535From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.7925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.611From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.4294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
14.7969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
14.8597From_analysisRNASeq.briggsae.WBls:0000004.control_mean
15.8551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
16.4246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.912793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
13.5673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.18621From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.2221From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.3767From_analysisRNASeq.briggsae.WBls:0000027.control_median
10.6535From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.9475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003513.4109From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.38765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
17.058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.5359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.25658From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.2397From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.97725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.693116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.716601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.780483From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.844365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.25749From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.77588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.61275From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.64429From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.38114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.45466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.353178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.721798From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.742261From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.13821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.37534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.886108From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.940235From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.70766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.5359From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.043From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.87249From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.27122From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138654
00138655
Ortholog (30)
ParalogWBGene00039663Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable NAD binding activity and oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Is an ortholog of C. elegans ctbp-1. In C. elegans, ctbp-1 is involved in negative regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14767a
CBG14767b
CBG14767c
Corresponding_CDS_historyCBG14767:bp194
CBG14767:bp255
Corresponding_transcriptCBG14767a.1
CBG14767b.1
CBG14767c.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1057350
Microarray_resultsGPL8303_CB6_WBGene00035167_A
GPL8303_CB6_WBGene00035167_B
GPL14143_CBG14767_1311-1370_0.791_18_A
GPL14143_CBG14767_1350-1409_0.784_36_B
GPL14143_CBG14767_1580-1639_0.774_48_C
ReferenceWBPaper00031210
MethodGene