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WormBase Tree Display for Gene: WBGene00035357

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Name Class

WBGene00035357SMapS_parentSequencecb25.fpc3857c2
IdentityVersion2
NameCGC_nameCbr-nhr-138From_analysisInferred_from_orthology
Sequence_nameCBG14996
Molecular_nameCBG14996
CBG14996.1
CBP41008
Other_nameCBG_14996Accession_evidenceNDBHE600932
Public_nameCbr-nhr-138
DB_infoDatabaseNDBlocus_tagCBG_14996
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-nhr-138
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000026.41865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.37909From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.58582From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.13279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.62326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.10454From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.19013From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.448121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.59125From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.73439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.20421From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.43013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.50423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
5.87776From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.25128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.08695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.1647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.87692From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.37743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.58602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.54046From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.77936From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.21161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
12.3899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.37604From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.682From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003520.6258From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.075From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.6312From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.1565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
17.9655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.07232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.1058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.0277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.18112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.45669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.91094From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.3652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.00768From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.73475From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.93446From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.1043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.47177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.02787From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.64762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.75221From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.00538From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.4646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.13462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.10841From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.22186From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.30422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.50423From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.06796From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.80502From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.57693From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138836
00138837
00138838
00138839
Ortholog (33)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-138.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14996
Corresponding_CDS_historyCBG14996:bp194
CBG14996:bp255
Corresponding_transcriptCBG14996.1
Other_sequenceCJC07132_1
CBC04553_1
Experimental_infoExpr_patternExpr1064945
Microarray_resultsGPL8303_CB6_WBGene00035357_A
GPL14143_CBG14996_629-688_0.672_134_C
GPL14143_CBG14996_798-857_0.794_66_B
GPL14143_CBG14996_1177-1236_0.568_195_A
MethodGene