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WormBase Tree Display for Gene: WBGene00035388

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Name Class

WBGene00035388SMapS_parentSequencecb25.fpc3857c2
IdentityVersion4
NameCGC_nameCbr-ceh-53From_analysisInferred_from_orthology
Sequence_nameCBG15039
Molecular_nameCBG15039
CBG15039.1
CBP38716
Other_nameCBG_15039Accession_evidenceNDBHE600932
Public_nameCbr-ceh-53
DB_infoDatabaseNDBlocus_tagCBG_15039
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-tsg-101
330 Oct 2007 14:18:25WBPerson2970Name_changeCGC_nameCbr-tsg-101 removed
428 May 2010 15:36:21WBPerson2970Name_changeCGC_nameCbr-ceh-53
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceh
AlleleWBVar00138196
WBVar00138197
RNASeq_FPKMWBls:00000020.750444From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.864531From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.3868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.661958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.728322From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.763245From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.10721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.29897From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.49074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.43261From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.69989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.4205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.348From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
14.2755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
15.7317From_analysisRNASeq.briggsae.WBls:0000004.control_mean
16.1836From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
17.2915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
18.4876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.192334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.227294From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.683853From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.63193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.868587From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.89036From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.50988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.798741From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.440012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.678464From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.79349From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.916916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.81703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.139486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.166965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.172448From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.177931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.204793From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.334792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.209192From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.240453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.282164From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.633359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.187833From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.279932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.659231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.139966From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.26412From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.64556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.659231From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.52003From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.676371From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.66933From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138869
Ortholog (14)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans ceh-53.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15039
Corresponding_CDS_historyCBG15039:bp194
CBG15039:bp255
Corresponding_transcriptCBG15039.1
Other_sequenceDviv_isotig12111
Acan_isotig05146
JI182734.1
Dviv_isotig12109
Experimental_infoExpr_patternExpr1050799
Microarray_resultsGPL8303_CB6_WBGene00035388_A
GPL8303_CB6_WBGene00035388_B
GPL14143_CBG15039_23-82_0.845_28_A
GPL14143_CBG15039_142-201_0.943_2_C
GPL14143_CBG15039_332-391_0.947_1_B
MethodGene