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WormBase Tree Display for Gene: WBGene00035831

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Name Class

WBGene00035831SMapS_parentSequencecb25.fpc4030a2
IdentityVersion4
NameCGC_nameCbr-nhr-121From_analysisInferred_from_orthology
Sequence_nameCBG15675
Molecular_nameCBG15675a
CBG15675a.1
CBP39471
CBG15675b
CBP44044
CBG15675b.1
Other_nameCBG_15675Accession_evidenceNDBHE600979
Public_nameCbr-nhr-121
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-121
324 Jul 2008 11:56:33WBPerson1847EventAcquires_mergeWBGene00035830
431 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270538
Acquires_mergeWBGene00035830
Split_intoWBGene00270538
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar00138286
WBVar00138287
WBVar00138288
WBVar00138285
RNASeq_FPKMWBls:000000214.5863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.94887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.94997From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
9.82838From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.28682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
7.61839From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.94299From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.384651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.620654From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.856657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.413769From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.84479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.19534From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.54588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.764439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.940478From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.976475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.01441From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.29018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.58509From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.87857From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.76044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.92218From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.47374From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.25927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.3239From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.0994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.7726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.76108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.9659From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.70095From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.17071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000413.54341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.81362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.1834From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.21795From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.55318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.9616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.8112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
4.75739From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.41732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.68339From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000632.18248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.60651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.27525From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.3315From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.65085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.9424From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.39564From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.49579From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.71633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.81362From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.25377From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.04444From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.98767From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139258
00139259
00139260
00139261
Ortholog (31)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-121.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15675a
CBG15675b
Corresponding_CDS_historyCBG15675:bp194
CBG15675:bp255
Corresponding_transcriptCBG15675a.1
CBG15675b.1
Other_sequenceTcol_isotig21033
Oden_isotig12979
JI166886.1
Name_isotig09484
Acan_isotig06947
Oden_isotig12980
Acan_isotig06946
Oden_isotig12978
Experimental_infoExpr_patternExpr1062247
Microarray_resultsGPL8303_CB6_WBGene00035831_A
GPL8303_CB6_WBGene00035831_B
GPL14143_CBG15675_1046-1105_0.885_27_C
GPL14143_CBG15675_1120-1179_0.902_18_B
GPL14143_CBG15675_1658-1717_0.931_4_A
MethodGene