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WormBase Tree Display for Gene: WBGene00035938

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Name Class

WBGene00035938SMapS_parentSequencecb25.fpc4030b
IdentityVersion2
NameCGC_nameCbr-kpc-1From_analysisInferred_from_orthology
Sequence_nameCBG15803
Molecular_nameCBG15803
CBG15803.1
CBP29045
Other_nameCBG_15803Accession_evidenceNDBHE600911
Public_nameCbr-kpc-1
DB_infoDatabaseNDBlocus_tagCBG_15803
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-kpc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classkpc
RNASeq_FPKMWBls:000000215.7208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
17.4189From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.6794From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.8564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
14.8783From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.7001From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.25639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000323.9081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
25.8631From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
27.818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
19.6291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
23.7851From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000447.5814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
48.0265From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
48.4715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
45.4842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
45.7616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
47.6961From_analysisRNASeq.briggsae.WBls:0000004.control_mean
51.1816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.8876From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.29801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
26.2944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.07039From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
16.6824From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.8925From_analysisRNASeq.briggsae.WBls:0000027.control_mean
31.9071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003519.1741From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.4191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
19.5261From_analysisRNASeq.briggsae.WBls:0000038.control_median
19.9896From_analysisRNASeq.briggsae.WBls:0000038.control_mean
22.633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.21977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
37.6867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004110.328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
10.5From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
12.6588From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.8176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.3567From_analysisRNASeq.briggsae.WBls:0000041.control_mean
25.7811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
19.6595From_analysisRNASeq.briggsae.WBls:0000041.control_mean
20.2994From_analysisRNASeq.briggsae.WBls:0000041.control_median
27.413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
29.1172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006311.0239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.7992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.32269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.21538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.37659From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.94755From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.0391From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
9.9368From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010117.6794From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.8545From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
19.4016From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.4481From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139387
00139388
00139389
Ortholog (30)
ParalogWBGene00000307Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025600Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031102Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038888Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans kpc-1. In C. elegans, kpc-1 is involved in several processes, including neuron development; positive regulation of developmental process; and protein processing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15803
Corresponding_CDS_historyCBG15803:bp194
Corresponding_transcriptCBG15803.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1067996
Microarray_resultsGPL8303_CB6_WBGene00035938_A
GPL8303_CB6_WBGene00035938_B
GPL8303_CB6_WBGene00035938_C
GPL8303_CB6_WBGene00035938_D
GPL8303_CB6_WBGene00035938_E
GPL14143_CBG15803_1584-1643_0.933_3_C
GPL14143_CBG15803_1636-1695_0.940_1_A
GPL14143_CBG15803_1767-1826_0.918_12_B
MethodGene