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WormBase Tree Display for Gene: WBGene00036331

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Name Class

WBGene00036331SMapS_parentSequencecb25.fpc4033c
IdentityVersion2
NameCGC_nameCbr-nhr-28From_analysisInferred_from_orthology
Sequence_nameCBG16375
Molecular_nameCBG16375
CBG16375.1
CBP03904
Other_nameCBG_16375Accession_evidenceNDBHE600961
Public_nameCbr-nhr-28
DB_infoDatabaseNDBlocus_tagCBG_16375
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-28
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000210.387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.18157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.85234From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.80697From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.39598From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.51695From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000034.26421From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.26861From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.27302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
4.61999From_analysisRNASeq.briggsae.WBls:0000003.control_mean
5.32275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000047.33486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.3947From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.45453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.85458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.54427From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
7.84503From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.03693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.658893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
16.641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.44532From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.58174From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.63415From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.14205From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.82298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.21319From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.504846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
11.7559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.21448From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.88819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.29859From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.70899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000412.34903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.86586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.008From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.15014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.4285From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.34898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.24956From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.75613From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.64837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.1744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.61491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.87571From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.10024From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.67296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.99046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.3866From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.50943From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.67803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.21319From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.85664From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.6632From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.02863From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139724
00139725
00139726
00139727
Contained_in_operonCBOPA0458
Ortholog (28)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-28.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16375
Corresponding_CDS_historyCBG16375:bp194
Corresponding_transcriptCBG16375.1
Other_sequenceCRC08495_1
CR10545
Hbac_isotig04649
Experimental_infoExpr_patternExpr1064899
Microarray_resultsGPL8303_CB6_WBGene00036331_A
GPL8303_CB6_WBGene00036331_B
GPL8303_CB6_WBGene00036331_C
GPL8303_CB6_WBGene00036331_D
GPL8303_CB6_WBGene00036331_E
GPL14143_CBG16375_176-235_0.659_93_C
GPL14143_CBG16375_483-542_0.750_42_B
GPL14143_CBG16375_932-991_0.812_6_A
MethodGene