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WormBase Tree Display for Gene: WBGene00036487

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Name Class

WBGene00036487SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-nhr-10From_analysisInferred_from_orthology
Sequence_nameCBG16594
Molecular_nameCBG16594
CBG16594.1
CBP18784
Other_nameCBG_16594Accession_evidenceNDBHE600949
Public_nameCbr-nhr-10
DB_infoDatabaseNDBlocus_tagCBG_16594
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar00124153
WBVar00124154
WBVar00124155
WBVar00124156
WBVar00124157
WBVar00124158
RNASeq_FPKMWBls:000000212.6155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.764From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
20.4658From_analysisRNASeq.briggsae.WBls:0000002.control_mean
30.018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.1187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
15.6897From_analysisRNASeq.briggsae.WBls:0000002.control_median
18.129From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000317.9115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
21.0179From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
24.1242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
22.4504From_analysisRNASeq.briggsae.WBls:0000003.control_mean
25.3155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000427.6029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
31.8582From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
36.1136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
28.4332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
32.1881From_analysisRNASeq.briggsae.WBls:0000004.control_mean
33.1018From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
35.6889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.09774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.1931From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.2646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.21697From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.0041From_analysisRNASeq.briggsae.WBls:0000027.control_mean
14.327From_analysisRNASeq.briggsae.WBls:0000027.control_median
22.4371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003517.4132From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.9056From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.7903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
16.3091From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.8279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
24.5457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.45836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004110.191From_analysisRNASeq.briggsae.WBls:0000041.control_mean
17.0635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.54475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
8.25018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.57794From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.90571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.5667From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.7867From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.6678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
17.9681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.2139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
10.3422From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
11.8696From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.1543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
17.6626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.97517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.6577From_analysisRNASeq.briggsae.WBls:0000063.control_median
12.0536From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.9732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010117.0635From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.7592From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
17.5379From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.9137From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139884
00139885
00139886
00139887
Ortholog (30)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-10. In C. elegans, nhr-10 is involved in regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16594
Corresponding_CDS_historyCBG16594:bp194
Corresponding_transcriptCBG16594.1
Other_sequenceCGC00280_1
JI232570.1
CBC09662_1
JI219127.1
CRC02082_1
JO467980.1
CR10871
CR01764
Experimental_infoExpr_patternExpr1066479
Microarray_resultsGPL8303_CB6_WBGene00036487_A
GPL8303_CB6_WBGene00036487_B
GPL14143_CBG16594_593-652_0.874_21_C
GPL14143_CBG16594_898-957_0.925_5_A
GPL14143_CBG16594_1084-1143_0.950_2_B
MethodGene