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WormBase Tree Display for Gene: WBGene00036489

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Name Class

WBGene00036489SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-rpia-1From_analysisInferred_from_orthology
Sequence_nameCBG16597
Molecular_nameCBG16597a
CBG16597a.1
CBP03936
CBG16597b
CBG16597b.1
Other_nameCBG_16597Accession_evidenceNDBHE600949
Public_nameCbr-rpia-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
224 Sep 2008 14:45:13WBPerson2970Name_changeCGC_nameCbr-rpia-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpia
RNASeq_FPKMWBls:000000248.2424From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
52.6556From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
53.7422From_analysisRNASeq.briggsae.WBls:0000002.control_mean
60.3286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
34.7159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
48.9856From_analysisRNASeq.briggsae.WBls:0000002.control_mean
50.449From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000334.8005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
38.1928From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
41.5851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
37.2724From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
37.886From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000429.931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
32.9886From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
36.0462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
22.46From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
31.6849From_analysisRNASeq.briggsae.WBls:0000004.control_mean
32.8367From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
37.1505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.2134From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.3032From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.56792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
39.1283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
24.6709From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.0168From_analysisRNASeq.briggsae.WBls:0000027.control_mean
52.1574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003540.8727From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003823.4202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
50.1129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
55.5315From_analysisRNASeq.briggsae.WBls:0000038.control_mean
61.6813From_analysisRNASeq.briggsae.WBls:0000038.control_median
73.2497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
75.3433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004150.8624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
60.8527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
70.3423From_analysisRNASeq.briggsae.WBls:0000041.control_mean
72.0741From_analysisRNASeq.briggsae.WBls:0000041.control_median
83.2954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
86.3587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
57.104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
71.4062From_analysisRNASeq.briggsae.WBls:0000041.control_mean
89.9637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006346.2082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
48.798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
49.5428From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
51.2904From_analysisRNASeq.briggsae.WBls:0000063.control_mean
55.6093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
56.2935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
52.576From_analysisRNASeq.briggsae.WBls:0000063.control_median
53.1808From_analysisRNASeq.briggsae.WBls:0000063.control_mean
62.6328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010147.8175From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
49.5428From_analysisRNASeq.briggsae.total_over_all_stages.control_median
47.7105From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
49.1704From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00139888
00139889
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to enable ribose-5-phosphate isomerase activity. Predicted to be involved in pentose-phosphate shunt, non-oxidative branch. Is an ortholog of C. elegans rpia-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16597a
CBG16597b
Corresponding_CDS_historyCBG16597:bp194
Corresponding_transcriptCBG16597a.1
CBG16597b.1
Other_sequence (55)
Experimental_infoExpr_patternExpr1062948
Microarray_resultsGPL8303_CB6_WBGene00036489_A
GPL8303_CB6_WBGene00036489_B
GPL14143_CBG16597_117-176_0.896_20_C
GPL14143_CBG16597_375-434_0.925_9_B
GPL14143_CBG16597_706-765_0.932_4_A
MethodGene