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WormBase Tree Display for Gene: WBGene00036494

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Name Class

WBGene00036494SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-ggtb-1From_analysisInferred_from_orthology
Sequence_nameCBG16602
Molecular_nameCBG16602
CBG16602.1
CBP03938
Other_nameCBG_16602Accession_evidenceNDBHE600949
Public_nameCbr-ggtb-1
DB_infoDatabaseNDBlocus_tagCBG_16602
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
208 Jan 2009 13:58:46WBPerson2970Name_changeCGC_nameCbr-gttb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classggtb
RNASeq_FPKMWBls:000000229.3164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
38.4774From_analysisRNASeq.briggsae.WBls:0000002.control_mean
41.0167From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
45.0992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
39.9268From_analysisRNASeq.briggsae.WBls:0000002.control_mean
42.6459From_analysisRNASeq.briggsae.WBls:0000002.control_median
44.2751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000351.6983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
52.2535From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
52.8087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
55.1256From_analysisRNASeq.briggsae.WBls:0000003.control_mean
60.8698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000441.8056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
43.8158From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
45.826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
42.0233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
44.9944From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
45.3029From_analysisRNASeq.briggsae.WBls:0000004.control_mean
51.8653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002718.2141From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.30223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
47.0345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.30552From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.4657From_analysisRNASeq.briggsae.WBls:0000027.control_median
21.067From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.6259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003525.6137From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.8565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
24.504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
26.9608From_analysisRNASeq.briggsae.WBls:0000038.control_median
28.0406From_analysisRNASeq.briggsae.WBls:0000038.control_mean
29.4176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
47.3844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004145.2245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
66.6636From_analysisRNASeq.briggsae.WBls:0000041.control_mean
68.3394From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
70.8513From_analysisRNASeq.briggsae.WBls:0000041.control_median
73.3632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
79.7271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
59.5814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
65.7617From_analysisRNASeq.briggsae.WBls:0000041.control_mean
68.3346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
68.337From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006333.283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
36.3747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
37.6976From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
38.6077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
41.3693From_analysisRNASeq.briggsae.WBls:0000063.control_mean
60.8836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
38.1526From_analysisRNASeq.briggsae.WBls:0000063.control_median
41.8112From_analysisRNASeq.briggsae.WBls:0000063.control_mean
44.0204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010138.3387From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
38.6077From_analysisRNASeq.briggsae.total_over_all_stages.control_median
40.9845From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
42.5322From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00139893
Ortholog (30)
ParalogWBGene00027250Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039684Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable catalytic activity. Is an ortholog of C. elegans ggtb-1. In C. elegans, ggtb-1 is involved in PERK-mediated unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16602
Corresponding_CDS_historyCBG16602:bp184
CBG16602:bp268
Corresponding_transcriptCBG16602.1
Other_sequence (37)
Experimental_infoExpr_patternExpr1067344
Microarray_resultsGPL8303_CB6_WBGene00036494_A
GPL14143_CBG16602_118-177_0.896_19_C
GPL14143_CBG16602_719-778_0.927_9_B
GPL14143_CBG16602_922-981_0.950_1_A
MethodGene