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WormBase Tree Display for Gene: WBGene00036894

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Name Class

WBGene00036894SMapS_parentSequencecb25.fpc4066
IdentityVersion2
NameCGC_nameCbr-sex-1From_analysisInferred_from_orthology
Sequence_nameCBG17178
Molecular_nameCBG17178
CBG17178.1
CBP18903
Other_nameCBG_17178Accession_evidenceNDBHE601483
Public_nameCbr-sex-1
DB_infoDatabaseNDBlocus_tagCBG_17178
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-sex-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsex
RNASeq_FPKMWBls:00000023.12153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.26311From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.36886From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.72195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.87542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.9955From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.19232From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003107.362From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
143.098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
71.6249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
68.5415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
94.4215From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004116.921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
117.943From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
118.966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
116.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
117.469From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
117.855From_analysisRNASeq.briggsae.WBls:0000004.control_mean
119.891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.755449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.32456From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.61903From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.59919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.9665From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.10911From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.89231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.27899From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.78963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.97932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.97978From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.98025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.56554From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.51295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.3596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.45552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.52658From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.6213From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.78709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.50412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.723229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.78038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.10166From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.11795From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630.930737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.949447From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.04002From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.2769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.04301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.05515From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.06016From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.16085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010117.449From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.61903From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.6943From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.70306From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140274
00140275
00140276
00140277
Ortholog (30)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans sex-1. In C. elegans, sex-1 is involved in primary sex determination and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17178
Corresponding_CDS_historyCBG17178:bp194
CBG17178:bp255
Corresponding_transcriptCBG17178.1
Other_sequenceJI175482.1
AF367207.1
JI168358.1
Experimental_infoExpr_patternExpr1066712
Microarray_resultsGPL8303_CB6_WBGene00036894_A
GPL8303_CB6_WBGene00036894_B
GPL14143_CBG17178_925-984_0.792_13_A
GPL14143_CBG17178_1040-1099_0.766_47_B
GPL14143_CBG17178_1165-1224_0.474_257_C
MethodGene