WormBase Tree Display for Gene: WBGene00037123

WBGene00037123 SMap: S_parent: Sequence: cb25.fpc4069c
  Identity: Version: 3
    Name: CGC_name: Cbr-del-5 From_analysis: Inferred_from_orthology
      Sequence_name: CBG17520
      Molecular_name: CBG17520
        CBG17520.1
        CBP38686
      Other_name: CBG_17520 Accession_evidence: NDB HE600959
      Public_name: Cbr-del-5
    DB_info: Database: NDB locus_tag CBG_17520
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:06 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 24 Jul 2008 11:56:44 WBPerson1847 Event: Acquires_merge: WBGene00037124
        3 24 Feb 2012 15:38:17 WBPerson2970 Name_change: CGC_name: Cbr-del-5
      Acquires_merge: WBGene00037124
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: del
    Allele: WBVar00023827
      WBVar00023812
      WBVar00023817
      WBVar00023832
      WBVar00023822
    RNASeq_FPKM: WBls:0000002 1.87286 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        2.75545 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        3.53356 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        5.97236 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        4.22708 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        4.3639 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        6.30766 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.036859 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.073718 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.024573 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.234971 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.257452 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.279932 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        0.24122 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.388614 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.510273 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.676672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.08044 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.859852 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.77007 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        4.36992 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.41314 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.6011 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        4.34235 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 3.69311 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.431471 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        3.67982 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        3.68011 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        4.46038 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        5.24095 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        5.36821 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 1.14453 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.58855 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.81544 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.04234 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        2.46983 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.10391 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        2.61193 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.7583 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.18152 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        3.48895 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 1.56635 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.96389 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.07121 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.92229 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        3.25959 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        2.08728 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.38771 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        2.70421 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 2.07121 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.91106 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        2.38771 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.78614 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00140541
      00140542
      00140543
    Ortholog (24)
    Paralog (27)
    Structured_description: Automated_description: Predicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans del-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG17520
    Corresponding_CDS_history: CBG17520:bp194
      CBG17520:bp255
    Corresponding_transcript: CBG17520.1
  Experimental_info: Expr_pattern: Expr1058254
    Microarray_results: GPL8303_CB6_WBGene00037123_A
      GPL8303_CB6_WBGene00037124_A
      GPL14143_CBG17520_570-629_0.777_16_C
      GPL14143_CBG17520_746-805_0.629_84_B
      GPL14143_CBG17520_1360-1419_0.820_1_A
  Method: Gene