WormBase Tree Display for Gene: WBGene00037227

WBGene00037227 SMap: S_parent: Sequence: cb25.fpc4069d
  Identity: Version: 2
    Name: CGC_name: Cbr-col-14 From_analysis: Inferred_from_orthology
      Sequence_name: CBG17662
      Molecular_name: CBG17662
        CBG17662.1
        CBP41936
      Other_name: CBG_17662 Accession_evidence: NDB HE600976
      Public_name: Cbr-col-14
    DB_info: Database: NDB locus_tag CBG_17662
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:06 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-col-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 102.023 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        116.188 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        132.36 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        178.87 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        107.96 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        109.105 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        34.759 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 15.8583 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        28.6047 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        3.11194 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        19.8989 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        27.98 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 44.3852 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        50.3874 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        56.3896 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        51.4445 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        53.8393 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        55.656 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        61.3211 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 354.073 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        399.169 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        403.021 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        440.412 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        420.952 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        421.716 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        486.302 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 15.1198 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 143.14 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        207.747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        260.89 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        285.535 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        314.033 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        477.22 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 176.826 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        19.3013 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        30.5859 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        5.48454 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        55.2283 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        8.01661 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        31.5107 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        32.4355 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        51.4409 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        55.2969 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 52.7577 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        55.2742 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        56.9027 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        58.1831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        60.5881 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        79.8226 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        4.09059 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        51.1718 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        56.0885 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 119.056 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        56.3896 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        112.155 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        55.2855 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00140678
    Ortholog (24)
    Paralog (155)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-14. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG17662
    Corresponding_CDS_history: CBG17662:bp255
    Corresponding_transcript: CBG17662.1
    Other_sequence (100)
  Experimental_info: Expr_pattern: Expr1059572
    Microarray_results: GPL8303_CB6_WBGene00037227_A
      GPL14143_CBG17662_69-128_0.863_13_B
      GPL14143_CBG17662_139-198_0.905_2_C
      GPL14143_CBG17662_608-667_0.820_26_A
  Method: Gene