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WormBase Tree Display for Gene: WBGene00037296

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Name Class

WBGene00037296SMapS_parentSequencecb25.fpc4069d
IdentityVersion2
NameCGC_nameCbr-nhr-258From_analysisInferred_from_orthology
Sequence_nameCBG17747
Molecular_nameCBG17747a
CBG17747a.1
CBP43547
CBG17747b
CBP46128
CBG17747b.1
Other_nameCBG_17747Accession_evidenceNDBHE600976
Public_nameCbr-nhr-258
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-258
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000020.298524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.438936From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.45205From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.566233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.454705From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.477031From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.502013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.068761From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.137522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.045841From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.692799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.92907From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.16534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0.762545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.06181From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.3403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.34808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.572913From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.71874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.768715From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.814043From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.53743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.00929From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.308187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.750998From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.768642From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.19381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.57257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.069978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.097508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.136299From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.175091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.449304From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.45464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.814866From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.838551From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.51308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.72101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.48844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.58782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.60782From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.95033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.96046From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.16788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.585095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.59782From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.73123From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.976015From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.00929From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.989842From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.08731From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140757
00140758
00140759
00140760
00140761
00140762
Ortholog (28)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable nuclear receptor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-258.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17747a
CBG17747b
Corresponding_CDS_historyCBG17747:bp255
Corresponding_transcriptCBG17747a.1
CBG17747b.1
Experimental_infoExpr_patternExpr1063486
Microarray_resultsGPL8303_CB6_WBGene00037296_A
GPL14143_CBG17747_572-631_0.870_34_C
GPL14143_CBG17747_687-746_0.812_72_A
GPL14143_CBG17747_762-821_0.900_16_B
MethodGene