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WormBase Tree Display for Gene: WBGene00037413

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Name Class

WBGene00037413SMapS_parentSequencecb25.fpc4077
IdentityVersion7
NameCGC_nameCbr-nhr-131.2From_analysisInferred_from_orthology
Sequence_nameCBG17901
Molecular_nameCBG17901a
CBG17901a.1
CBP42461
CBG17901b
CBP42534
CBG17901b.1
Other_nameCBG_17901Accession_evidenceNDBHE601413
Public_nameCBG17901
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
231 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270651
331 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270652
408 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCbr-nhr-131.2
508 May 2019 10:09:28WBPerson1983Name_changeCGC_nameRemoved
601 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameCbr-nhr-131
704 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameRemoved
828 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-nhr-131.2
Split_intoWBGene00270652
WBGene00270651
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000020.742556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.84716From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.23253From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.56641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.17769From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.39947From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.16927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.141685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.616663From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.09164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.542681From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.592002From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.864408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.04995From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.2355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.645831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.844776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.28027From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.81085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.119323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.16612From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.54658From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.83245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.91064From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.18952From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.1442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.26736From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.730255From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.4505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.63045From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.8209From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.81039From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.29247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000412.46506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.60814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.65801From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.70788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.22074From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.10189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.7837From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.95681From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.85952From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.99835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.354329From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.43428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.544588From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.93433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.384382From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.414436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.522896From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.93433From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.21077From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.08343From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.33006From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140839
00140840
00140841
00140842
Ortholog (29)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-131.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17901a
CBG17901b
Corresponding_CDS_historyCBG17901:bp255
Corresponding_transcriptCBG17901a.1
CBG17901b.1
Experimental_infoMicroarray_resultsGPL14143_CBG17901_374-433_0.715_127_C
Remark[190507 pad] The CGC name Cbr-nhr-131.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200204 pad] The CGC name Cbr-nhr-131 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00028673Curator_confirmedWBPerson1983
MethodGene