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WormBase Tree Display for Gene: WBGene00037417

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Name Class

WBGene00037417SMapS_parentSequencecb25.fpc4077
IdentityVersion2
NameCGC_nameCbr-nhr-210From_analysisInferred_from_orthology
Sequence_nameCBG17906
Molecular_nameCBG17906
CBG17906.1
CBP34636
Other_nameCBG_17906Accession_evidenceNDBHE601413
Public_nameCbr-nhr-210
DB_infoDatabaseNDBlocus_tagCBG_17906
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-210
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar00040929
WBVar00040899
WBVar00040914
WBVar00040934
WBVar00040904
WBVar00040919
WBVar00040909
WBVar00040924
RNASeq_FPKMWBls:00000020.87551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.7761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.25292From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.96818From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.670976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.56421From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.64388From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.756366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.11069From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.46502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.14088From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.20126From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.20801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.55465From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.9013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.30961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.46209From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.47899From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.51396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.173805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.309553From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.3736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.95232From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.569646From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.829739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
3.17167From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.02738From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.532575From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.53597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.57076From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.60554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.07546From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.62775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.1673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.41415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.71617From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.73672From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.05928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.22396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.14162From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.43883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.48098From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.58236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.40057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.82775From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.08304From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.55273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.10239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.85523From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.99264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
2.03784From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001012.04558From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.07013From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.75342From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.84303From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00140847
00140848
00140849
00140850
Ortholog (21)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-210.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17906
Corresponding_CDS_historyCBG17906:bp194
Corresponding_transcriptCBG17906.1
Experimental_infoExpr_patternExpr1053964
Microarray_resultsGPL14143_CBG17906_730-789_0.879_15_C
GPL14143_CBG17906_888-947_0.856_24_B
GPL14143_CBG17906_1102-1161_0.930_2_A
MethodGene