WormBase Tree Display for Gene: WBGene00037419

WBGene00037419 SMap: S_parent: Sequence: cb25.fpc4077
  Identity: Version: 2
    Name: CGC_name: Cbr-nhr-250 From_analysis: Inferred_from_orthology
      Sequence_name: CBG17908
      Molecular_name: CBG17908
        CBG17908.1
        CBP10728
      Other_name: CBG_17908 Accession_evidence: NDB HE601413
      Public_name: Cbr-nhr-250
    DB_info: Database: NDB locus_tag CBG_17908
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:07 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-nhr-250
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000002 0.061743 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.068191 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.07587 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.097677 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.056903 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.064967 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.071444 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.142888 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.028578 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (11)
      WBls:0000027 0.026727 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.080182 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.020371 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.030231 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.040742 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.034126 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.048185 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.086766 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.09637 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.250695 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.022873 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.042926 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.057325 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.071723 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.403271 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.47556 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.568777 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.697887 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.06583 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        1.50841 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.119813 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.834127 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.87987 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.57751 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.59344 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.057418 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.499842 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.704675 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.071723 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.278151 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.059581 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.2826 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00140851
      00140852
      00140853
      00140854
    Ortholog (19)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-250. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG17908
    Corresponding_CDS_history: CBG17908:bp194
      CBG17908:bp255
    Corresponding_transcript: CBG17908.1
    Other_sequence: CBC13387_1
  Experimental_info: Expr_pattern: Expr1056719
    Microarray_results: GPL8303_CB6_WBGene00037419_A
      GPL14143_CBG17908_464-523_0.882_24_C
      GPL14143_CBG17908_807-866_0.890_21_B
      GPL14143_CBG17908_1035-1094_0.674_140_A
  Method: Gene