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WormBase Tree Display for Gene: WBGene00037540

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Name Class

WBGene00037540SMapS_parentSequencecb25.fpc4079a
IdentityVersion3
NameCGC_nameCbr-imph-1From_analysisInferred_from_orthology
Sequence_nameCBG18043
Molecular_name (16)
Other_nameCBG_18043Accession_evidenceNDBHE600963
Cbr-zbp-1From_analysisInferred_from_orthology
Public_nameCbr-imph-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
225 Jan 2013 14:33:12WBPerson2970Name_changeCGC_nameCbr-zbp-1
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-imph-1
Other_nameCbr-zbp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classimph
RNASeq_FPKMWBls:000000254.2364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
64.6095From_analysisRNASeq.briggsae.WBls:0000002.control_mean
69.5951From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
69.9971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
66.5545From_analysisRNASeq.briggsae.WBls:0000002.control_mean
69.7961From_analysisRNASeq.briggsae.WBls:0000002.control_median
72.3892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000325.4686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
27.6667From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.8649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
27.9692From_analysisRNASeq.briggsae.WBls:0000003.control_mean
28.574From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000424.5178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
25.1303From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
25.7428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
25.3513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
25.7926From_analysisRNASeq.briggsae.WBls:0000004.control_mean
25.9463From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
27.4046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002722.9956From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
26.0139From_analysisRNASeq.briggsae.WBls:0000027.control_mean
47.1788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.86723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
35.0872From_analysisRNASeq.briggsae.WBls:0000027.control_median
35.6523From_analysisRNASeq.briggsae.WBls:0000027.control_mean
64.5674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003566.9534From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003829.6622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
52.6228From_analysisRNASeq.briggsae.WBls:0000038.control_mean
52.905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
56.9883From_analysisRNASeq.briggsae.WBls:0000038.control_median
61.0716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
66.8525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004151.2005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
76.6544From_analysisRNASeq.briggsae.WBls:0000041.control_mean
82.685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
84.0525From_analysisRNASeq.briggsae.WBls:0000041.control_median
85.42From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
87.3122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
40.0455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
51.2305From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
66.3156From_analysisRNASeq.briggsae.WBls:0000041.control_mean
66.9577From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063111.379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
71.6089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
72.4661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
74.3319From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
76.6919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
81.2956From_analysisRNASeq.briggsae.WBls:0000063.control_mean
74.7168From_analysisRNASeq.briggsae.WBls:0000063.control_median
75.1017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
80.2633From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010154.6088From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
58.482From_analysisRNASeq.briggsae.total_over_all_stages.control_median
52.4807From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
53.7491From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00140976
00140977
Ortholog (28)
ParalogWBGene00028003Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031125Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033516Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035843Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036033Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036432Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036433Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans imph-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18043a
CBG18043b
CBG18043c
CBG18043d
CBG18043e
Corresponding_CDS_historyCBG18043:bp194
CBG18043:bp255
Corresponding_transcriptCBG18043a.1
CBG18043b.1
CBG18043c.1
CBG18043d.1
CBG18043e.1
CBG18043e.2
Other_sequence (14)
Experimental_infoExpr_patternExpr1063805
Microarray_resultsGPL8303_CB6_WBGene00037540_A
GPL8303_CB6_WBGene00037540_B
GPL14143_CBG18043_1767-1826_0.868_56_C
GPL14143_CBG18043_2078-2137_0.919_20_A
GPL14143_CBG18043_2163-2222_0.895_39_B
MethodGene