WormBase Tree Display for Gene: WBGene00037559

WBGene00037559 SMap: S_parent: Sequence: cb25.fpc4079a
  Identity: Version: 5
    Name: CGC_name: Cbr-pdcd-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG18067
      Molecular_name: CBG18067
        CBG18067.1
        CBP43400
      Other_name: CBG_18067 Accession_evidence: NDB HE600963
      Public_name: Cbr-pdcd-2
    DB_info: Database: NDB locus_tag CBG_18067
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:07 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 31 Aug 2016 10:30:13 WBPerson4025 Event: Split_into: WBGene00270551
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-pdcd-2
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:22 WBPerson1983 Name_change: CGC_name: Cbr-pdcd-2
        6 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Cbr-pdcd-2
      Split_into: WBGene00270551
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pdcd
    RNASeq_FPKM: WBls:0000002 29.359 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        35.0302 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        39.4466 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        53.9506 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        41.095 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        41.3749 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        47.1598 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 51.6821 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        54.2927 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        56.9033 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        44.6408 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        51.0754 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 37.4655 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        40.6262 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        43.7869 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        33.5325 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        37.4979 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        37.8361 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        38.0238 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 11.047 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        22.5164 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.44092 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        8.18365 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        15.35 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        15.9224 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        30.5487 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 19.7253 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.1287 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        25.8057 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        28.2245 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        28.8972 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        29.5698 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        34.3 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 38.8359 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        57.6838 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        60.74 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        61.423 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        62.106 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        69.0532 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        43.0027 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        58.4679 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        77.0697 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 35.7243 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        38.9037 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        39.4099 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        42.3666 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        42.5827 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        56.5089 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        37.031 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        39.1568 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        41.6574 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 35.7243 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        35.813 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        37.4817 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        37.5499 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00141009
    Contained_in_operon: CBOP0049
    Ortholog (33)
    Structured_description: Automated_description: Predicted to be located in cytoplasm. Is an ortholog of C. elegans pdcd-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG18067
    Corresponding_CDS_history: CBG18067:bp194
      CBG18067:bp255
    Corresponding_transcript: CBG18067.1
    Other_sequence (34)
  Experimental_info: Expr_pattern: Expr1052850
    Microarray_results: GPL14143_CBG18067_445-504_0.832_71_B
      GPL14143_CBG18067_673-732_0.879_35_A
      GPL14143_CBG18067_1224-1283_0.933_1_C
  Remark: [190208 pad] The CGC name Cbr-pdcd-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbr-pdcd-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene