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WormBase Tree Display for Gene: WBGene00037566

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Name Class

WBGene00037566SMapS_parentSequencecb25.fpc4079a
IdentityVersion2
NameCGC_nameCbr-snfc-5From_analysisInferred_from_orthology
Sequence_nameCBG18075
Molecular_nameCBG18075
CBG18075.1
CBP45862
Other_nameCBG_18075Accession_evidenceNDBHE600963
Public_nameCbr-snfc-5
DB_infoDatabaseNDBlocus_tagCBG_18075
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
219 Dec 2008 11:31:11WBPerson2970Name_changeCGC_nameCbr-snfc-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnfc
RNASeq_FPKMWBls:000000238.6957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
41.6252From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
44.948From_analysisRNASeq.briggsae.WBls:0000002.control_mean
54.5231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
48.0742From_analysisRNASeq.briggsae.WBls:0000002.control_median
48.2623From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.2054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003171.176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
211.046From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
250.917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
212.326From_analysisRNASeq.briggsae.WBls:0000003.control_mean
214.886From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004169.568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
172.25From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
174.932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
148.675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
163.587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
177.083From_analysisRNASeq.briggsae.WBls:0000004.control_mean
228.651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002715.2016From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.84842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
35.8611From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.89527From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.7404From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.1261From_analysisRNASeq.briggsae.WBls:0000027.control_median
33.3569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003526.8683From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003825.8121From_analysisRNASeq.briggsae.WBls:0000038.control_mean
29.2431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
29.8878From_analysisRNASeq.briggsae.WBls:0000038.control_median
30.5326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
34.7567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.7162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004153.7176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
84.4633From_analysisRNASeq.briggsae.WBls:0000041.control_mean
93.0752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
93.6525From_analysisRNASeq.briggsae.WBls:0000041.control_median
94.2297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
96.8307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
64.6666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
72.708From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
79.2046From_analysisRNASeq.briggsae.WBls:0000041.control_mean
82.8916From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006333.3103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
34.4179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
34.5973From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
36.2097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
38.6126From_analysisRNASeq.briggsae.WBls:0000063.control_mean
54.5277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
35.4035From_analysisRNASeq.briggsae.WBls:0000063.control_median
40.9507From_analysisRNASeq.briggsae.WBls:0000063.control_mean
52.6414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010138.6957From_analysisRNASeq.briggsae.total_over_all_stages.control_median
61.9233From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
51.759From_analysisRNASeq.briggsae.total_over_all_stages.control_median
74.5567From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141022
00141023
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to be involved in chromatin remodeling. Predicted to be located in nuclear chromosome. Is an ortholog of C. elegans snfc-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18075
Corresponding_CDS_historyCBG18075:bp194
CBG18075:bp255
Corresponding_transcriptCBG18075.1
Other_sequence (80)
Experimental_infoExpr_patternExpr1064740
Microarray_resultsGPL8303_CB6_WBGene00037566_A
GPL8303_CB6_WBGene00037566_B
GPL14143_CBG18075_166-225_0.614_152_C
GPL14143_CBG18075_475-534_0.809_62_A
GPL14143_CBG18075_546-605_0.914_18_B
MethodGene