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WormBase Tree Display for Gene: WBGene00037827

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Name Class

WBGene00037827SMapS_parentSequencecb25.fpc4079b
IdentityVersion2
NameCGC_nameCbr-ymel-1From_analysisInferred_from_orthology
Sequence_nameCBG18391
Molecular_nameCBG18391a
CBG18391a.1
CBP43801
CBG18391b
CBP44077
CBG18391b.1
Other_nameCBG_18391Accession_evidenceNDBHE600936
Public_nameCbr-ymel-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ymel-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classymel
RNASeq_FPKMWBls:000000233.2159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
50.1115From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.2505From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
58.8682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
40.8078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
47.7856From_analysisRNASeq.briggsae.WBls:0000002.control_mean
49.5291From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000360.7076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
67.7673From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
74.827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
69.0805From_analysisRNASeq.briggsae.WBls:0000003.control_mean
71.707From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000432.6546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
33.9094From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
35.1642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
32.6144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
34.1533From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
34.3554From_analysisRNASeq.briggsae.WBls:0000004.control_mean
37.1903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.2071From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
20.625From_analysisRNASeq.briggsae.WBls:0000027.control_mean
46.2846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.38314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
27.1098From_analysisRNASeq.briggsae.WBls:0000027.control_mean
28.2458From_analysisRNASeq.briggsae.WBls:0000027.control_median
46.5643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003555.7522From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003821.6367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
47.9696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
55.0987From_analysisRNASeq.briggsae.WBls:0000038.control_mean
60.3From_analysisRNASeq.briggsae.WBls:0000038.control_median
72.6304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
78.158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004161.5725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
66.3269From_analysisRNASeq.briggsae.WBls:0000041.control_mean
67.1853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
67.6456From_analysisRNASeq.briggsae.WBls:0000041.control_median
68.1059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
68.4438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
67.1884From_analysisRNASeq.briggsae.WBls:0000041.control_mean
67.7349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
67.9204From_analysisRNASeq.briggsae.WBls:0000041.control_median
70.088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006337.5601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
42.2328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
45.1897From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
46.2248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
46.4665From_analysisRNASeq.briggsae.WBls:0000063.control_mean
61.1252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
45.7072From_analysisRNASeq.briggsae.WBls:0000063.control_median
47.6883From_analysisRNASeq.briggsae.WBls:0000063.control_mean
53.7972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010147.9788From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
51.3084From_analysisRNASeq.briggsae.total_over_all_stages.control_median
48.58From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
49.639From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00141363
00141364
00141365
00141366
00141367
00141368
Ortholog (35)
ParalogWBGene00033831Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035321Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036653Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; ATP hydrolysis activity; and peptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Is an ortholog of C. elegans ymel-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG18391a
CBG18391b
Corresponding_CDS_historyCBG18391:bp255
Corresponding_transcriptCBG18391a.1
CBG18391b.1
Other_sequence (64)
Experimental_infoExpr_patternExpr1053351
Microarray_resultsGPL8303_CB6_WBGene00037827_A
GPL8303_CB6_WBGene00037827_B
GPL14143_CBG18391_1124-1183_0.838_81_B
GPL14143_CBG18391_1248-1307_0.892_29_C
GPL14143_CBG18391_1341-1400_0.858_58_A
MethodGene