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WormBase Tree Display for Gene: WBGene00038357

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Name Class

WBGene00038357SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-nhr-135From_analysisInferred_from_orthology
Sequence_nameCBG19080
Molecular_nameCBG19080a
CBG19080a.1
CBP11057
CBG19080b
CBP46486
CBG19080b.1
Other_nameCBG_19080Accession_evidenceNDBHE601047
Public_nameCbr-nhr-135
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-135
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000021.41267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.39809From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.84869From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.93291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.51006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.17608From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.17937From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000032.0081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.04941From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.09071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
4.37496From_analysisRNASeq.briggsae.WBls:0000003.control_mean
7.02608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000044.56336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.89343From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.2235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.30249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.59584From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.91899From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
5.97085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.869106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.91328From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.05413From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.38From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.19689From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.16072From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.48051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.81412From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.903818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.61705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.35221From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.63076From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.08737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.91481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.06616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.29156From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.42533From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.5591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.82046From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.36503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.34975From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.80002From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.14041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.37785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.41491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.4245From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.61895From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.52059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.56803From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.10944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
2.37199From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.51693From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001013.14964From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.91943From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.70836From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.19737From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141845
00141846
00141847
00141848
Ortholog (32)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-135.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19080a
CBG19080b
Corresponding_CDS_historyCBG19080:bp194
Corresponding_transcriptCBG19080a.1
CBG19080b.1
Other_sequenceCRC02051_1
CJC10571_1
CR04765
CJC02835_1
Experimental_infoExpr_patternExpr1064368
Microarray_resultsGPL8303_CB6_WBGene00038357_A
GPL8303_CB6_WBGene00038357_B
GPL14143_CBG19080_223-282_0.896_20_C
GPL14143_CBG19080_494-553_0.883_34_A
GPL14143_CBG19080_564-623_0.912_9_B
MethodGene