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WormBase Tree Display for Gene: WBGene00038409

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Name Class

WBGene00038409SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-nhr-44From_analysisInferred_from_orthology
Sequence_nameCBG19141
Molecular_nameCBG19141
CBG19141.1
CBP40126
Other_nameCBG_19141Accession_evidenceNDBHE601047
Public_nameCbr-nhr-44
DB_infoDatabaseNDBlocus_tagCBG_19141
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-44
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000023.08715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.44448From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.23976From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.18764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.75059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.26582From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.61747From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.889745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.03852From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.1873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.25988From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.7026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000414.2984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
15.1838From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
16.0691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
14.2075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.2261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
15.1874From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.1359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.185181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.20901From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.97933From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.5438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.00214From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.1398From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.07059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.66483From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.070912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.16702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.80154From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.88598From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.60495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.36328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.31606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.39829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.42197From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.44565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.02597From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.94387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.19242From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.61321From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.93919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
4.6362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.905193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.44616From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.5025From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.21588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.60723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.46753From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.53843From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.57436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.08715From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.07506From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.12708From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.58999From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00141907
00141908
00141909
00141910
Ortholog (21)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-44.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19141
Corresponding_CDS_historyCBG19141:bp194
CBG19141:bp255
Corresponding_transcriptCBG19141.1
Other_sequenceCJC08095_1
Experimental_infoExpr_patternExpr1058834
Microarray_resultsGPL8303_CB6_WBGene00038409_A
GPL8303_CB6_WBGene00038409_B
GPL14143_CBG19141_669-728_0.948_3_C
GPL14143_CBG19141_675-734_0.950_2_B
GPL14143_CBG19141_781-840_0.954_1_A
MethodGene