WormBase Tree Display for Gene: WBGene00038437

WBGene00038437 SMap: S_parent: Sequence: cb25.fpc4126
  Identity: Version: 2
    Name: CGC_name: Cbr-nhr-30.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG19169
      Molecular_name: CBG19169
        CBG19169.1
        CBP46989
      Other_name: CBG_19169 Accession_evidence: NDB HE601047
      Public_name: Cbr-nhr-30.1
    DB_info: Database: NDB locus_tag CBG_19169
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:08 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cbr-nhr-30.1
        3 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        4 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbr-nhr-30.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000002 0.350582 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.377427 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.380443 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.401255 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.311471 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.360938 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.365512 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.154216 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.462647 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.293714 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.587428 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.384692 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.659707 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.797323 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1.52909 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.119823 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.755364 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        2.14627 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.13305 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.6507 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        8.33669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 2.17555 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.257992 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.386543 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.616397 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.624855 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.863166 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.957887 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.073742 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.094067 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.102202 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.110337 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.145392 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.30342 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.206878 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.317876 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.639238 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.686452 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.049247 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.246236 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.100007 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.353809 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.257992 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.673741 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.367126 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.869471 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00141933
      00141934
      00141935
      00141936
    Ortholog (27)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-30. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG19169
    Corresponding_CDS_history: CBG19169:bp255
    Corresponding_transcript: CBG19169.1
  Experimental_info: Expr_pattern: Expr1057246
    Microarray_results: GPL8303_CB6_WBGene00038437_A
      GPL14143_CBG19169_435-494_0.889_3_C
      GPL14143_CBG19169_509-568_0.926_2_B
      GPL14143_CBG19169_778-837_0.963_1_A
  Remark: [210528 pad] The CGC name Cbr-nhr-30.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene