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WormBase Tree Display for Gene: WBGene00038645

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Name Class

WBGene00038645SMapS_parentSequencecb25.fpc4126
IdentityVersion3
NameCGC_nameCbr-unc-41From_analysisInferred_from_orthology
Sequence_nameCBG19421
Molecular_nameCBG19421
CBG19421.1
CBP44046
Other_nameCbr-apt-10From_analysisInferred_from_orthology
CBG_19421Accession_evidenceNDBHE601047
Public_nameCbr-unc-41
DB_infoDatabaseNDBlocus_tagCBG_19421
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-apt-10
306 Feb 2008 14:44:59WBPerson2970Name_changeCGC_nameCbr-unc-41
Other_nameCbr-apt-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00026637
RNASeq_FPKMWBls:00000022.96009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.29142From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.73079From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.18338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.97059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.35069From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.46121From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.8813From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.06914From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.25699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.1613From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.3456From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.8594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
11.0053From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.1512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.8274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.0615From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.088From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
11.3816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.6408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.52988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.07994From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.41687From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.1377From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.3003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.86037From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003515.4646From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.5085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.44014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.93819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.77505From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.61192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.62469From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000411.00265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.06594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.19182From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.3177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.14393From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.18944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.25664From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.69055From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.19559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
4.37198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.19174From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.289From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.39841From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.41377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.85752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.35506From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.40609From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.17165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.93819From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.13463From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.00907From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.72518From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (31)
ParalogWBGene00029947Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030469Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033291Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034945Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Adaptor complexes medium subunit family; AP-2 complex subunit mu, C-terminal superfamily; and Mu homology domain. Is an ortholog of C. elegans unc-41. In C. elegans, unc-41 is involved in positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19421
Corresponding_CDS_historyCBG19421:bp255
Corresponding_transcriptCBG19421.1
Other_sequence (35)
Experimental_infoExpr_patternExpr1051739
Microarray_resultsGPL8303_CB6_WBGene00038645_A
GPL8303_CB6_WBGene00038645_B
GPL14143_CBG19421_3626-3685_0.844_67_B
GPL14143_CBG19421_3830-3889_0.849_60_A
GPL14143_CBG19421_4030-4089_0.888_32_C
MethodGene